Escherichia coli O26 H11 11368 (EHEC): ECO26_2117
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Entry
ECO26_2117 CDS
T01098
Symbol
lsrD
Name
(GenBank) AI2 transporter protein LsrD, membrane component of ABC superfamily
KO
K10557
AI-2 transport system permease protein
Organism
eoj
Escherichia coli O26:H11 11368 (EHEC)
Pathway
eoj02010
ABC transporters
eoj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
eoj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ECO26_2117 (lsrD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECO26_2117 (lsrD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eoj02000
]
ECO26_2117 (lsrD)
Transporters [BR:
eoj02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
ECO26_2117 (lsrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
PspB
Motif
Other DBs
NCBI-ProteinID:
BAI25384
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Position
2085290..2086282
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AA seq
330 aa
AA seq
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MRIRYGWELALAALLVIEIVAFGAINPRMLDLNMLLFSTSDFICIGIVALPLTMVIVSGG
IDISFGSTIGLCAIALGVLFQSGVPMPLAILLTLLLGALCGLINAGLIIYTKVNPLVITL
GTLYLFAGSALLLSGMAGATGYEGIGGFPMAFTDFANLDVLGLPVPLIIFLICLLVFWLW
LHKTHAGRNVFLIGQSPRVALYSAIPVNRTLCALYAMTGLASAVAAVLLVSYFGSARSDL
GASFLMPAITAVVLGGANIYGGSGSIIGTAIAVLLVGYLQQGLQMAGVPNQVSSALSGAL
LIVVVVGRSVSLHRQQIKEWLARRANNPLP
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattcgctacggttgggaactggctcttgccgcactgctcgttattgagattgtc
gcatttggtgcaattaacccgcgaatgttagatctcaatatgttgctgttcagcaccagt
gactttatctgcattggcattgtcgccctaccgctgacgatggtgattgtcagtggcggg
atcgatatttcgtttggttcgaccatcggcctctgcgccattgcattgggcgtactgttt
caaagtggtgtgccgatgccgctggcgatactcctgaccttactgctcggcgcattgtgc
gggctgatcaacgccggattaattatctataccaaagttaacccgctggtgattacgctt
ggcacgctgtatctgtttgccggaagcgctctgctgctttccggtatggccggagcgacg
gggtacgaaggtattggtggattcccgatggcgtttacagatttcgctaacctggatgtg
ctgggactccccgttccgctgattatcttcctgatatgtctcctcgttttctggctctgg
ctgcataaaacccatgccggacgtaatgtgtttttgattgggcaaagcccgcgcgtggcg
ctttatagcgcgattccagttaaccgcaccttatgtgcgctctatgccatgacggggctg
gcgtctgcggtcgccgctgtgctgctggtatcgtattttggttcagcacgttccgatctc
ggtgcgtcgtttctgatgcccgccatcaccgccgtggtgcttggcggggccaatatttat
ggtggttccggttccattatcggcaccgccattgcggttttattagtgggatatttgcag
caaggtttgcaaatggcaggagtgccaaatcaggtgtccagcgccctttccggtgcgcta
cttatcgtcgttgtcgtaggtcgttccgttagcctgcatcgccagcaaattaaagagtgg
ctggcgcgtcgggccaataacccattgccataa
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