Escherichia coli O26 H11 11368 (EHEC): ECO26_2573
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Entry
ECO26_2573 CDS
T01098
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
eoj
Escherichia coli O26:H11 11368 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eoj03016
]
ECO26_2573 (rnd)
Enzymes [BR:
eoj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ECO26_2573 (rnd)
Transfer RNA biogenesis [BR:
eoj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ECO26_2573 (rnd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
BAI25814
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All DBs
Position
complement(2496535..2497662)
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AA seq
375 aa
AA seq
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MNYQMITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGI
TDWSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFAS
MVEEYSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAAL
DECRLMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVR
EEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVEKAQTLPEEALPQPMLNLMDM
PGYRKVFKAIKSLITDVSETHKISAELLASRRQINQLLNWHWKLKPQNNLPALISGWRGE
LMAEALHNLLQEYPQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaattaccaaatgattaccacggacgatgcgctggcttctttgtgtgaagccgtccgt
gcctttccggcgatagccctggatactgaatttgttcgtacgcgcacttattacccgcag
ctggggttgattcaacttttcgatggcgagcatctggcgctaattgatcctctcgggatc
accgactggtcaccgctgaaagcgatcctgcgcgatccgtccatcacaaaatttctccat
gcaggcagtgaagatctggaagtgttcctcaatgtctttggcgaattaccacaacccttg
attgacacgcaaatccttgctgccttctgcggacgcccgatgtcatggggtttcgcttcc
atggtggaagagtattccggcgttacgctggacaagagtgaatcgcgcaccgactggctg
gccagaccgctgaccgaacgtcagtgtgaatacgcagcggcggatgtctggtatctgtta
ccgatcaccgccaagcttatggtagaaacggaggcctccggctggctacctgcggcgctg
gatgaatgccgcctgatgcaaatgcgtcgtcaggaagtcgttgcgccggaagatgcctgg
cgtgatatcaccaatgcctggcagttacgcacacgccaactggcctgtctgcaactgtta
gccgactggcgactgcgcaaggcgcgagagcgtgatctggcggtgaactttgtcgtgcgt
gaagagcatttgtggtcggtcgcgcgttatatgccgggaagtttaggcgaactggacagc
ctgggtttatccggtagcgaaatccgctttcacggtaaaacgctgctggcgctggtggaa
aaagcgcagacattgccggaagaggccttaccgcagccgatgcttaacctgatggacatg
cctggttatcgtaaagtgtttaaagcgattaagtcgctgattactgacgtgagcgaaacg
cataagatcagcgccgaattgctggcatcgcgtcggcaaatcaaccaactgctgaactgg
cactggaaactgaaaccgcagaacaatttgccggcgctgatttccggctggcgtggtgag
ctgatggcggaagcattacacaatttattgcaggaatatccgcagtaa
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