Escherichia coli O26 H11 11368 (EHEC): ECO26_2980
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Entry
ECO26_2980 CDS
T01098
Symbol
alkA
Name
(GenBank) 3-methyl-adenine DNA glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
eoj
Escherichia coli O26:H11 11368 (EHEC)
Pathway
eoj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ECO26_2980 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eoj03400
]
ECO26_2980 (alkA)
Enzymes [BR:
eoj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ECO26_2980 (alkA)
DNA repair and recombination proteins [BR:
eoj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ECO26_2980 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
BAI26201
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All DBs
Position
complement(2900308..2901165)
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AA seq
285 aa
AA seq
DB search
MYTLNWQPPYDWSWMLGFLAARAVSGVETVAEDYYARSLAVGEYRGVVTAIPDIARHTLH
INLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGKLGAARPGLRLPGCIDAFEQGVRA
ILGQLVSVAMAAKLTAKVVQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMPLKRAE
ALIHLANAALEGSLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYL
IKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDGTDEL
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtataccctgaactggcagccgccgtatgactggtcgtggatgttgggatttctcgcc
gcccgtgcagtgagtggtgtggaaacggtcgctgaggattattatgcccgtagtctggcg
gtgggcgaatatcgcggcgtggtgactgctattccggatatagcccgccatactctgcac
ataaatttaagtgcaggtttagaacccgttgccgctgagtgtctggcgaaaatgagccgc
ctgtttgatctgcaatgtaacccgcagattgttaacggtgcgttgggcaagttaggcgcg
gcgcggcccggattgcgtttacccggctgtattgatgcttttgagcagggtgtgcgggcg
attttaggccaactggtgagcgtggcgatggcggcaaaattgactgccaaagttgtacag
ctttatggcgaacggctggatgattttccggagtatatctgcttccccacgcctcagcgg
ctggcagcagccgacccgcaggcattaaaagcgttaggcatgccgttgaaacgggcagag
gcactgattcatctggcaaatgcggcgctggagggcagcttaccaatgacaattccgggc
gatgtggagcaggcgatgaaaacgctgcaaacttttccgggtatcgggcgctggacggcg
aattatttcgctttgcgtggctggcaggcgaaagatgtttttctgccggatgattatctg
attaaacagcgatttccggggatgacaccggcacaaatccgccgttatgccgagcgctgg
aagccctggcgttcttatgcgctgttgcatatctggtatacggaaggctggcaaccagac
ggaacggacgaattgtag
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