Escherichia coli O26 H11 11368 (EHEC): ECO26_4773
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Entry
ECO26_4773 CDS
T01098
Symbol
uvrD
Name
(GenBank) DNA-dependent ATPase I and helicase II UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
eoj
Escherichia coli O26:H11 11368 (EHEC)
Pathway
eoj03420
Nucleotide excision repair
eoj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ECO26_4773 (uvrD)
03430 Mismatch repair
ECO26_4773 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eoj03400
]
ECO26_4773 (uvrD)
Enzymes [BR:
eoj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECO26_4773 (uvrD)
DNA repair and recombination proteins [BR:
eoj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ECO26_4773 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ECO26_4773 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BAI27932
LinkDB
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Position
complement(4781227..4783389)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTMHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG
TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgacaaacagcgcgaagcggtggccgcg
ccacgcagcaaccttctggtgctggcgggcgcgggcagtggtaagacgcgcgtactggtg
catcgtatcgcctggctgatgagcgtggaaaactgctcgccatactcgattatggcggtg
acgtttaccaacaaagcggcggcggagatgcgtcatcgtatcgggcagctgatgggcacc
agccagggcggcatgtgggtcggcaccttccacgggctggcgcaccgtctgctgcgtgcg
caccatatggacgccaatctgccgcaggattttcagatcctcgacagcgaggaccagcta
cgcctgctcaaacgcctaatcaaggcgatgaacctcgacgagaagcagtggccgccgcgc
caggcaatgtggtacatcaacagccagaaagatgaaggcctgcgtccacatcatattcaa
agctacggtaatccggtggagcagacctggcagaaggtgtatcaggcgtatcaggaagcg
tgtgaccgcgcgggcctggtggacttcgccgagctgctgctacgtgctcacgagttgtgg
cttaacaagccgcatatccttcagcactatcgcgaacggtttaccaatatcctggtggac
gaattccaggataccaacaacattcagtatgcgtggatccgcctgctggcgggcgatacc
ggcaaagtgatgatcgttggcgatgacgatcagtcaatctacggctggcgtggagcgcag
gtggagaatattcagcgtttcctcaatgatttccccggtgctgaaactatccgtctggag
cagaactaccgctctaccagcaatattctgagcgccgcgaacgccctgattgaaaacaac
aacgggcgtttgggtaaaaaactgtggaccgatggcgcggacggtgagcctatttccctc
tattgcgcttttaacgaactcgatgaagcgcgttttgtggttaaccgcatcaaaacctgg
caggacaacggcggggcgcttgccgagtgcgccattctctaccgcagtaacgcccagtcg
cgtgtgctggaagaagcactgttgcaggcgagtatgccgtaccgtatttacggcgggatg
cgcttcttcgaacgccaggaaatcaaagatgcgctctcgtatctgcgcctgattgccaac
cgtaacgacgacgcggcctttgagcgtgtggtgaatacgccaacgcggggtattggtgac
cggacgctggacgtggtacgtcagacatcgcgcgatcgccagttaacactctggcaggca
tgtcgtgaactgttgcaggaaaaagccctcgccggacgtgctgccagcgccttacagcgg
tttatggaactgatcgacgccttagcgcaggaaactgccgatatgccgctgcatgtacag
actgaccgggtaattaaagactccggcctgcgtaccatgtacgagcaggagaagggcgaa
aaaggtcagacgcgtatcgaaaacttagaggaactggtgacggcaacgcgccagttcagc
tacaacgaagaagacgaagatttaatgccgctgcaggcgttcctatcccatgcggcgctg
gaagcaggcgaagggcaggcggatacctggcaagatgcggtacaactgatgaccatgcac
tcggcgaaaggtctggagttcccgcaggtgtttatcgtcggtatggaagagggcatgttc
ccaagccagatgtcgctggatgaaggcgggcgtctggaagaagaacgccgtctggcctac
gttggcgtaacccgcgcgatgcagaaactgacgctgacctacgcggaaactcgccgtctg
tatggcaaagaggtttaccatcgcccgtcgcgctttattggcgagctgccggaagagtgt
gtggaagaggtgcgcctgcgcgccacggtaagccgcccggtcagccatcagcggatgggt
acgccgatggtcgagaacgacagcggctacaagctcggccagcgcgtacgccacgctaag
tttggtgaaggcaccattgtcaatatggaaggcagcggtgagcatagccgtttgcaggtg
gcatttcagggccagggtattaaatggctggtggcggcttatgcccggctggagtcggtg
taa
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