Escherichia coli O26 H11 11368 (EHEC): ECO26_4876
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Entry
ECO26_4876 CDS
T01098
Symbol
trmE
Name
(GenBank) GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
eoj
Escherichia coli O26:H11 11368 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eoj03016
]
ECO26_4876 (trmE)
Transfer RNA biogenesis [BR:
eoj03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
ECO26_4876 (trmE)
Prokaryotic type
Methyltransferases
ECO26_4876 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Ras
RsgA_GTPase
AIG1
ABC_tran
Roc
Arf
AAA_28
SRPRB
Gtr1_RagA
AAA_18
Motif
Other DBs
NCBI-ProteinID:
BAI28034
LinkDB
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Position
complement(4900442..4901806)
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AA seq
454 aa
AA seq
DB search
MSDNDTIVAQATPPGRGGVGILRISGLKAREVAETVLGKLPKPRYADYLPFKDADGSVLD
QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPGLRIARPGEFSERAFLYDK
LDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEAQLNDVIADLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVL
FMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGETLGMSEVNGHALIRLSAR
TGEGVDVLRNHLKQSMGFDTNMEGGFLARRRHLQALEQAAEHLQQGKAQLLGAWAGELLA
EELRLAQQNLSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataatgacactatcgtagcccaggccacgcctccgggacgtggcggtgttggc
atcctgcgcatctccggcctcaaagcccgtgaagttgccgaaaccgtgctgggtaaacta
cctaagccgcgctacgccgattatttgccatttaaagacgccgacggcagcgtgctcgat
caggggattgcgctatggttccctggcccgaactcgttcaccggcgaagatgtgcttgaa
ctgcagggtcatggcggtccggtgatcctcgacctgctgttaaaacgcattctgaccatt
cccggcctgcggattgctcgccctggtgagttttccgaacgcgcgtttctttacgataaa
ctcgacttagcccaggctgaggcgattgccgatcttatcgacgccagctcggaacaggcg
gcccgttcggcacttaactcgctgcaaggcgcattctccgcacgggttaatcatctggta
gaagccctcacccacttgcgcatttacgtcgaagcggcaattgatttccctgatgaagag
atcgatttcctctccgacggcaaaattgaagcccagctcaatgacgttattgccgatctt
gatgcagtgcgtgctgaagcacgtcagggtagtttgttgcgcgaagggatgaaagtggtg
attgccggacgtcctaacgccggtaaatcgagcctgttaaacgcgctggctggccgtgaa
gcagcaatcgtaaccgatatcgccggaactacgcgtgacgtgttgcgtgagcatatccac
attgacggaatgccgctgcatatcatcgacaccgccgggctacgtgaagccagtgacgaa
gtggaacgtattgggatcgagcgcgcgtggcaggaaattgaacaggccgaccgggtgctg
tttatggtcgatggcaccacaacagacgccgtggatccggcagagatctggccggaattt
atcgcccgtctgccagcgaaactgccgatcaccgtggtgcgcaataaagccgatatcacc
ggcgaaacgctgggaatgagtgaagtgaacggtcacgcgttaattcgtctctcggcaagg
actggtgaaggcgtggacgtgctgcgtaaccatctcaaacagagcatgggctttgacacc
aacatggaaggcggtttcctggcgcgccgtcgccacttacaggcgctggaacaggcagcg
gagcatttgcagcaaggtaaagcgcaactgttaggtgcctgggcgggtgaactgctggcg
gaagagttgcgcctggcacagcagaacttaagcgaaatcaccggggaatttacttcagac
gacctgctggggcggattttctccagcttctgtattggtaagtaa
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