Escherichia coli O55 H7 CB9615 (EPEC): G2583_3163
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Entry
G2583_3163 CDS
T01190
Symbol
yfiF
Name
(GenBank) rRNA methylase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
eok
Escherichia coli O55:H7 CB9615 (EPEC)
Brite
KEGG Orthology (KO) [BR:
eok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eok03009
]
G2583_3163 (yfiF)
03016 Transfer RNA biogenesis [BR:
eok03016
]
G2583_3163 (yfiF)
Ribosome biogenesis [BR:
eok03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
G2583_3163 (yfiF)
Transfer RNA biogenesis [BR:
eok03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
G2583_3163 (yfiF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ADD57691
LinkDB
All DBs
Position
complement(3220236..3221273)
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AA seq
345 aa
AA seq
DB search
MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPR
DRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALF
QSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKK
RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI
RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEY
EGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatgaaatgaaaggtaaaagcggcaaggtcaaagtgatgtatgtccgcagtgat
gatgattctgataaacgtacccacaacccgcgtaccgggaaagggggcgggcgtccagga
aaatctcgtgctgacggtggccgtcgccccgcccgcgatgacaaacagagtcagccccgt
gaccgcaagtgggaagattcgccgtggcgcacggtttcccgcgcgccgggtgatgagacg
ccggaaaaggccgatcacggtggcatcagtggtaaaagttttattgatccggaagtgttg
cgtcgtcagcgtgcggaagaaacccgcgtctacggcgaaaacgcctgtcaggcactgttc
cagagccgtccggaagcgattgttcgcgcctggtttatccagagtgtaacgccgcgtttt
aaagaagccttgcgctggatggcagcaaaccgcaaagcgtaccatgtggtagatgaagcg
gaattgacaaaagcgtcaggcacggaacatcacggtggcgtttgcttcctgatcaaaaag
cgtaatggcacaaccgtgcagcagtgggtaagccaggcaggcgcgcaggattgtgttctg
gcactggaaaacgaatctaacccgcataacctgggtggcatgatgcgcagctgcgcgcac
tttggcgtgaaaggtgttgtggtgcaggatgcggcactgctggagtcgggggcggctatc
cgtaccgcagaaggcggcgcagagcacgttcagccgattactggcgacaacattgttaac
gtgctggatgatttccgtcaggcgggttacaccgtagtgacaacttccagcgagcagggt
aaaccgctgttcaaaaccagtctgccagcgaaaatggtactggtgctgggtcaggaatat
gaagggttaccggatgccgcacgcgatccgaacgatctgcgcgtgaagattgatggtact
ggcaacgttgccgggctgaatatctctgtcgcaaccggcgttcttcttggcgaatggtgg
cgtcagaataaagcctga
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