Emticicia oligotrophica: Emtol_0732
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Entry
Emtol_0732 CDS
T02272
Name
(GenBank) transcriptional regulator, LacI family
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
eol
Emticicia oligotrophica
Brite
KEGG Orthology (KO) [BR:
eol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eol03000
]
Emtol_0732
Transcription factors [BR:
eol03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Emtol_0732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_4
Peripla_BP_3
LacI
HTH_23
HTH_24
HTH_10
HTH_11
Sigma70_r4_2
Sigma70_r4
HTH_IclR
HTH_28
HTH_38
HTH_Tnp_ISL3
MarR
HTH_AraC
Sigma54_DBD
MarR_2
HTH_Crp_2
GntR
Sigma70_r3
HTH_3
TrmB
HTH_AsnC-type
HTH_36
SpoIIID
MerR
Trp_repressor
HTH_31
Xre-like-HTH
Fe_dep_repress
HTH_8
HTH_5
TnsD
Motif
Other DBs
NCBI-ProteinID:
AFK01884
LinkDB
All DBs
Position
complement(449222..450232)
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AA seq
336 aa
AA seq
DB search
MQRHQATIKEIAQKLGVSISTVSRALQNNTRIGLRTRERVWELAKSMHYVPNPAAIFLKK
NRTFTIGVLLPYLQEEFFSMAISGIEDVALERGYNVVVSQSRDKFDREEKALKSFLSSRV
DGVIASVAAETNNYSHFKEVENFGTPLVFFDRVPRNLEANKVRCSITDGAFEAIEYLVNK
GVNRIALLNGPSNLEVCDERLNGYLTAVQKFNVPTSPKYIKACDLSKDDTIGKMQELLSL
EEPPEAILTFNDYVALYAMQVCKQKGLIPNKDVLFVSFANLPMTFYMDNPPLASVEQFAY
NMGVKATDLLIDIIENPKNEMPPYEEIVVGTKLIIH
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgacatcaggctaccattaaagaaattgcacagaagttgggtgtctctatttcc
accgtttcacgagctttacaaaataatactcgaataggtctgcgtacgcgtgagagagta
tgggaattagctaaatcaatgcactatgttcctaatcccgcagccatttttttgaagaaa
aaccgaactttcaccattggcgttttattaccatacctacaagaagagtttttttcaatg
gcaatctcgggcatcgaagatgtggccttagaaagaggctacaacgtggttgtgagccaa
tctcgtgataaattcgatagagaagaaaaagctctaaaatcttttttaagtagtagagta
gatggcgtaattgcctcagtagcagccgaaacaaataattatagccattttaaagaagta
gaaaactttggtacgccactggttttttttgatagagtgccacgtaatttagaggcaaat
aaagtacgttgtagtatcacagatggtgcttttgaagctattgagtatttagttaataaa
ggggttaatcgtattgcactgcttaatggtccatccaatcttgaagtatgtgatgaacga
ttgaacgggtatttgacagctgttcaaaaatttaatgtacctacttctccaaaatatatc
aaagcttgtgatttatcgaaagatgatacaattggtaaaatgcaagaacttctcagctta
gaagaaccacctgaggctattctaaccttcaacgactacgtggctttatacgccatgcag
gtttgtaaacaaaaaggactaatacccaacaaagatgttttattcgttagctttgctaat
ttaccaatgactttctatatggataatccacctttggcatcggttgagcaatttgcttat
aatatgggtgtgaaagcaactgaccttttaatagatattatcgaaaatcctaagaacgaa
atgccgccttatgaagaaatcgtggttggtacaaagttgattatccattaa
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