Emticicia oligotrophica: Emtol_1432
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Entry
Emtol_1432 CDS
T02272
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
eol
Emticicia oligotrophica
Pathway
eol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Emtol_1432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eol03021
]
Emtol_1432
03400 DNA repair and recombination proteins [BR:
eol03400
]
Emtol_1432
Enzymes [BR:
eol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Emtol_1432
Transcription machinery [BR:
eol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Emtol_1432
DNA repair and recombination proteins [BR:
eol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Emtol_1432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
BSH_YknX
Apocytochr_F_C
RPOC_hybrid
Peptidase_M23
BSH_RND
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AFK02578
UniProt:
A0ABM5MZR9
LinkDB
All DBs
Position
1322492..1326808
Genome browser
AA seq
1438 aa
AA seq
DB search
MSLKKNKKLNSDFQSITISLASPESILESSFGEVTQPETINYRTYKPEMGGLFCERIFGP
VKDWECHCGKYKRIRYKGIICDRCGVEVTEKKVRRERMGHIELVVPVAHIWYFRSLPNKI
GYLLGMSSKKLDQIIYYERYVVIQPGIKSEDGVSSNDFLTEEEYLDIMDKLPRDNQMLDD
KDPNKFIAKMGAEALEMMLSRLDLDQLSYDLRHAAATDTSQQRKADALKRLKIVEALRDA
NTRIENKPEWMVIRMVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLLEIK
APEVILRNEKRMLQEAVDSLFDNSRKVNAVRSEGNRALKSLSDMLKGKQGRFRQNLLGKR
VDYSGRSVIVVGPELKLHECGLPKDMAAELFKPFIIRKLIERGIVKTVKSAKKIVDRKDA
VVWDILENVLKGHPVLLNRAPTLHRLGIQAFQPKLVEGKAIQLHPLVCTAFNADFDGDQM
AVHVPLGQEAIMEASILMLAAHNILNPANGAPITVPSQDMVLGLYYVTKGRKSTATHKEP
GEGQTFYSAEEVIIALNEGAISKHAHIKCRVKVKNEKGELVWKIVDTVAGRILFNQCVPE
EVGYLDELLTKKKLQQLIGRVFKEAGYSRTAKFLDDIKELGYQTAFRGGLSIGLDNIIVP
EEKAKLVEDAKKEVEEVQNNYMFGIITERERYNQIIDIWGRVNSSMRVILLKQLEEDQAG
FNPIYMMMHSGARGSQEQVRQLGGMRGLMAKPQKNIQGSVGEIIENPILSNFKEGLDVLE
YFISTHGARKGLADTALKTADAGYLTRRLHDVAQDVVVNEVDCGTLRGIQVSALKDNEDI
VEPLSERILGRTSVYDVIDPLTKKLIVKAGEEITEEIAAEIDETAIETVEIRSALTCETQ
TGVCAKCYGRNLATGRMAEGGEAVGVIASQSIGEPGTQLTLRTFHTGGTAQNVASEANIK
AKFAGTIQLEELRTVQSVDRDGNEITTVLGRRGEIRILETGTNNVLIVNNVPYGATLLVT
DGQQVNKGDDLCHWDQFNAVILSEIDGTVEYEAIEENITYKEEADEQTGFRDKVIIESKD
RTKNPAIVIRSANGEEGKAYNLPVLARLTVEDGKVIKAGQILAKIPRAINMNRDITGGLP
RVTELFEARNPSNPAVVSEIDGIVQYGAIKRGNREIYVEAKDGVKMKYMVPLSKLFLVQD
GDFVRAGDPLSDGAITPADILRIKGPTAVQEYLVNEVQAVYRQQGVKIADKHIEVIVRQM
MQKVEVIDSGDTLFLDNQMVDKWVVRAGNDKILDKKVVMDAGASDKFKPGQIITAREMRD
ENSRLKRADLPQMVVRDAMPAVARPTLQGITTASLGTESFMSAASFQETTKVLSEAAVRG
KRDTLDGLKENVIVGHLIPAGTGNRKYQNIQVGSKAELEAAAEKKRQQEAAKQRREFV
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaaagaaaaataaaaaattaaatagtgacttccaaagtatcaccattagcttg
gcttcaccggagtcaatcttggaaagttcttttggagaagttacacaacctgagacgatt
aactaccgtacctacaaacccgaaatgggcggtttgttttgcgagcgtatctttggtcca
gtgaaagactgggaatgtcactgcggtaaatacaaacgtatccgttataaaggtatcatt
tgcgaccgttgtggtgtggaagttacagaaaagaaagtacgtcgcgagcgtatgggtcac
atcgaactcgttgttccggtagctcatatctggtacttccgtagcttaccaaataaaatt
ggttatttgctcggcatgtcgtcgaagaaactcgaccaaattatctactacgaacgctac
gtagttatccaaccaggtatcaagtctgaagatggtgtttcatcgaatgatttcttaacc
gaagaagaatatttggatatcatggataaacttccacgcgataaccaaatgctcgacgat
aaagaccctaataaatttatcgccaaaatgggtgctgaggcattagaaatgatgctttct
cgccttgacttagaccaattatcatacgaccttcgtcacgctgcggctaccgatacttca
caacaacgtaaagctgatgctttgaaacgtttgaaaatcgtagaagcattacgtgatgca
aacactcgtattgaaaataaaccagagtggatggttatccgtatggtaccagttattcca
ccagaattgcgtccgttagtgccattagatggtggtcgtttcgctacttctgatttgaat
gacctttaccgtcgtgtaattatccgtaacaaccgcttgaagcgtttgttggaaatcaaa
gcaccagaagtaatcttacgtaacgaaaaacgtatgttacaagaggccgttgactcattg
ttcgacaactctcgtaaagtaaatgcggttcgttcggaaggtaaccgtgccttgaaatct
ctttctgatatgttgaaaggtaagcaaggacgtttccgtcagaacttacttggaaaacgt
gttgactactcaggtcgttcggtaatcgtggtaggtccagaattgaaactacacgagtgc
ggtttaccaaaagatatggcggcagagttattcaaaccgtttattatcagaaagttaatt
gagcgtggaattgttaagaccgtaaaatcagcgaagaaaatcgttgacagaaaagacgca
gttgtttgggatattctcgaaaacgtattgaaaggacaccctgttctcctcaaccgtgcc
cctacgctccaccgtcttggtattcaggcattccaacctaaattagtagaaggtaaagct
attcaattgcacccgctcgtttgtacggccttcaacgctgactttgacggtgaccagatg
gcggtacacgtaccacttggtcaagaagcaatcatggaagcttccatcttgatgttggcg
gctcataatatcttgaaccctgccaacggagctccaatcaccgtaccttcacaagacatg
gtgttgggtctttactacgtaactaaaggccgtaaatcaaccgctactcataaagagcca
ggcgaaggacaaacattctactcagcagaggaagtaatcattgcccttaacgaaggtgct
atttcgaaacacgcacacatcaaatgccgtgtgaaagtgaaaaacgaaaaaggtgagctt
gtttggaaaatcgttgataccgtagctggacgtattttatttaaccaatgcgtaccagaa
gaagtaggttaccttgacgaattattgactaagaaaaagcttcaacagctaatcggtcgt
gtattcaaagaggctggctactctcgtacagcgaaattcttggatgatatcaaagaatta
ggttatcaaacagccttcagaggtggtttgtcaatcggtttagataatatcatcgttcca
gaagagaaagcaaaactcgttgaagatgcgaaaaaagaagtagaagaagtacaaaacaac
tacatgtttggtatcattactgagcgtgaacgttataaccaaatcattgatatttggggc
cgcgtgaatagttcgatgcgtgtgattctattgaaacaattggaagaagaccaagctggt
ttcaacccaatttatatgatgatgcactcgggagctcgtggttcgcaagagcaagtacgt
cagttaggtggtatgagaggtttgatggcgaaaccacaaaagaacatccaaggttcggtt
ggtgaaatcatcgaaaacccaatcctttctaactttaaagaaggtctcgacgttcttgag
tactttatctctacgcacggtgctcgtaaaggtttggccgatactgccttgaaaactgcc
gatgctggttacttaactcgtcgtttgcacgatgttgctcaagatgtagttgttaatgaa
gttgactgtggaacactccgcggtattcaggtttcagcattgaaagataacgaagatatc
gttgaaccactttctgagcgtatcttaggccgtacatcagtttatgatgtaatcgaccca
cttacgaagaaactcatcgtaaaagcaggcgaagaaatcactgaagaaattgcagctgaa
atcgacgaaactgctatcgaaactgtagagattcgttcggcattgacttgcgaaactcaa
acaggtgtttgtgcgaaatgttatggacgtaaccttgcaactggccgcatggccgaaggt
ggtgaagcagttggtgtaattgcctcacaatcaatcggtgagccaggtacacagcttaca
cttcgtacgttccacacagggggtactgcccaaaacgttgcttctgaagcaaacatcaaa
gcaaaatttgcgggtactattcaattagaagaattacgtacagtacaatcagttgaccgt
gatggcaacgaaattacaacggtgttaggtcgtcgtggtgagattcgtatccttgaaact
ggtacaaacaacgtacttattgtaaataacgtaccttatggtgctactttattggttacc
gatggccaacaagtaaataaaggtgatgacctttgccattgggatcaattcaacgccgta
atcctttcagaaattgatggtacggtagagtacgaagcaatcgaagagaatatcacttat
aaagaagaagccgatgagcaaactggtttccgtgataaagttatcatcgaatcgaaagac
cgtacgaaaaacccagctatcgttattcgttcagcaaatggcgaagaaggaaaagcttac
aacttaccagtattagctcgtttgacagttgaagacggcaaggtaatcaaagcaggtcaa
atcttagcaaagattcctcgtgcaatcaacatgaaccgagatattacgggtggtttgcca
cgtgtaactgagttattcgaggctcgtaacccttcaaatccagcagttgtttctgaaatc
gatggtatcgtacaatacggagctatcaaacgtggtaatcgtgagatctacgttgaagca
aaagatggtgtgaaaatgaagtacatggttccactatcgaaactattcttagtacaagat
ggtgacttcgtacgtgcaggtgacccactttctgatggtgcgattactccagccgatatt
cttcgtatcaaaggaccaaccgccgtacaagaatatttagtaaacgaagtacaagccgta
tatcgtcaacaaggggtaaaaatcgctgataagcacattgaggtaattgttcgccaaatg
atgcaaaaagttgaagtgattgactctggtgacaccctattccttgacaatcaaatggtt
gataagtgggtagtacgtgcaggaaacgacaaaattcttgacaaaaaagtagtaatggat
gctggtgcgtctgacaagttcaaacctggtcagattatcactgcccgtgaaatgcgtgac
gaaaacagccgcttgaagcgtgctgacttaccgcaaatggtagtgcgtgatgcaatgcct
gcggtagcacgtccgacactccaaggtatcactactgcatcgttgggtacagaatcattt
atgtcggcggcatcattccaagagacaacgaaagtgttatcagaagctgctgtaagaggt
aagcgtgatacactcgatggcttgaaagaaaacgtaatcgttggacacttgattccagca
ggaacgggtaaccgtaaataccaaaacatccaagttggtagcaaagcagaactcgaagca
gcagccgaaaagaaaagacaacaagaggcagcaaaacaacgcagagagtttgtttaa
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integrated database retrieval system
