Emticicia oligotrophica: Emtol_1479
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Entry
Emtol_1479 CDS
T02272
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
eol
Emticicia oligotrophica
Pathway
eol03030
DNA replication
eol03430
Mismatch repair
eol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Emtol_1479
03430 Mismatch repair
Emtol_1479
03440 Homologous recombination
Emtol_1479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eol03032
]
Emtol_1479
03400 DNA repair and recombination proteins [BR:
eol03400
]
Emtol_1479
Enzymes [BR:
eol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Emtol_1479
DNA replication proteins [BR:
eol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Emtol_1479
DNA repair and recombination proteins [BR:
eol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Emtol_1479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AFK02625
UniProt:
A0ABM5MZL0
LinkDB
All DBs
Position
1374929..1375744
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AA seq
271 aa
AA seq
DB search
MYTHSLKLRKPLAVIDLETTGVNVAKDKIVELCIAKAKLDGTVEVKTKLINPGIPIPLES
SLIHGIYDEDVKDAPTFKQIGRALAQFLEGCDLAGFNSNRFDVPMLVEEFLRIDIDFDVK
NRKLVDAQRIFHLMEPRTLSAAYKFFCNKTLDNAHSAEADTLATLEVLCSQVERYDGVKV
KNDKGEEYEPVKNDMEVLHQLTSANIVDFAQRMILNNKGEIVFNFGKHNGKPVKAVLKQE
PQYYDWMINGDFPLDTKRKLTEIKLKMMLDK
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtacactcactcactcaagttacgtaaacccttagctgtaattgacctcgaaactaca
ggtgtaaatgtggccaaagataaaattgtagaactctgtattgctaaggcaaaacttgat
ggtacggtagaagtaaaaaccaaacttatcaatccgggtattccaattccgctagaaagt
agcctcattcacggtatttatgatgaagatgtgaaagatgctcctacattcaagcaaatc
ggtagagcactcgctcaatttttagaaggctgcgatttagcaggttttaatagcaatcgt
tttgatgtaccgatgttggttgaagagtttttgagaattgatattgatttcgatgtaaaa
aatcgcaagctggtagatgctcaaagaattttccacctaatggaaccacgcacgctttcg
gcagcatataaatttttctgcaataaaaccctcgacaatgcccatagtgccgaagcagat
actttggcaacactagaagtactttgttctcaggtagaaagatacgacggcgtaaaagtg
aaaaacgataaaggtgaagagtacgagcctgttaaaaatgatatggaagtgctccaccag
ttaacctcagccaatattgttgattttgctcaacgcatgattttaaacaataagggagaa
attgtgtttaactttgggaaacataatggaaaaccagtaaaagcagttttaaaacaagaa
ccccagtattatgattggatgattaacggagacttcccgcttgataccaaacgtaaactc
actgaaattaagctaaaaatgatgcttgataaatag
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