Emticicia oligotrophica: Emtol_1966
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Entry
Emtol_1966 CDS
T02272
Name
(GenBank) protein-export membrane protein SecD
KO
K12257
SecD/SecF fusion protein
Organism
eol
Emticicia oligotrophica
Pathway
eol02024
Quorum sensing
eol03060
Protein export
eol03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
eol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Emtol_1966
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Emtol_1966
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Emtol_1966
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
eol02044
]
Emtol_1966
Secretion system [BR:
eol02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Emtol_1966
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
AFK03106
LinkDB
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Position
complement(1967779..1970781)
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AA seq
1000 aa
AA seq
DB search
MRNKGGIVALLVAFLAISVYFLARTWKANDIRKDAEAYATDKSGKVDYTKKQRYLDSLWK
QPVFLGMTTTEDLMKQELGLGLDLQGGMSVILEVSPTEIVRALANSRDPKVATAISKAQE
RAANSSANFVDLFAEEFKKVAPDTKLSSIFSNSSNRGTLSLESSDSQVISYIKKEVDGAF
DRAFRIIQTRVDKFGVANPNLQRLSGTNRIQVELPGVDNPQRVRKLLSGAAKLEFCEVYS
MQEIAPAFDGLSAILLQMDAEAKAAAKTDLNKIAGKGDNAAAATNDTSKNSLAAKLAGGS
KTDTSKKDSTALAQRQSNAFSNLFVGTGYGVAVRVKDTSRVNQIMRRPDVQSLFPADANF
VYDVKPRANGTNANEDIVDIYFVKDLGKAPLEGDVVTNATQDFDERGKPAVEMQMNAEGA
RKWKALTAANVGRQVAIILDNFVYSAPVVNGEIGGGRSSISGNFTVEEALDLANVLKAGK
LPAPTNVISEDIVGATVGSEAARAGILSSIIGVLFVLAFVMIYYNKAGLIANIALIVNLF
LLLGVMASFGATLTLPGIAGLVLSVGMSVDANVLIYERIKEELALGKTFATAVRDGFQNA
MSSIIDSNVTTLITGAVLFIFGSGLILGFATTLLIGIFTSLFSAIFVSRLLFEYYIGKGK
TVSFYTKFTEKLFKDSQFDFVSKRKLYYTISSAIIIAGIVSIFFKGFGLGVDFLGGRTYV
AKFEKTVNTEEIDAALKGTFEGQAIEVKTFGGFDQVKITTPYKIENTNPEIEKQIENNVN
NALANVNGNKGKITSSSKVGPTIANDAIGGALKAILLSIALVFIYIYLRFRSLAFGYGAL
VALFHDVAIILGIFSIFRGWLPFSLDVDQAFVGAVLTIMGYSMNDTVVVFDRVREYLREK
RGVREDIPTVINNALNSTLSRTAVTGFSTLIVLLVLLIFGGETIRGFVFAMFVGVIVGTY
SSLFVATPIVVDAMQRDLKNEDAKLAAVPVDAEAKKGKKA
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacaaaggtggtatagtcgctctattggtggcttttttagcaattagtgtttac
ttcttggctcgtacttggaaggcaaacgacatcagaaaagacgcagaagcgtatgcaaca
gacaaatcaggtaaagttgattacacaaaaaaacaacgttatttagattctctttggaaa
caacccgttttcttaggaatgactacaactgaagacctaatgaaacaagaattaggttta
ggccttgaccttcaagggggtatgagtgttattttggaggtatcacctacagaaatcgtt
cgtgcattggcaaattctcgtgaccctaaagtagccacggctatctctaaagcacaagaa
agagcagctaatagcagtgctaattttgtagatttatttgctgaagaatttaagaaagta
gctcctgatacaaaattatctagtattttctcaaatagttcaaatcgtggtacactaagt
ttggaatcttctgatagccaagtgataagctatatcaaaaaagaagttgatggtgctttc
gaccgtgcattccgcattatccaaacgcgtgttgataaatttggtgttgctaaccctaac
ttacaaagactttcgggaactaaccgtattcaagtagaattgccgggtgtagataatcct
caacgtgtgcgtaaactcctttctggtgctgcaaaattagagttttgcgaagtatatagc
atgcaagaaattgctccagcgtttgatggtttatcggctatcttattacaaatggatgct
gaggcaaaggctgctgcgaaaacagatttaaataaaattgcaggaaaaggtgataacgca
gcggcagctacaaatgatacttcaaaaaatagtttagcagctaaattggctgggggaagc
aaaacagatacttcgaaaaaggattcaactgctctagctcaacgccaatcaaatgcattt
agtaatttattcgttggaactggatatggcgtagcagtacgtgtgaaagacacttcacgt
gtaaaccaaatcatgcgtcgtccggatgttcaatcattgttcccagctgatgcaaacttt
gtatatgatgtaaaaccacgtgccaatggtacaaacgcaaacgaagatattgttgatatt
tactttgttaaagatttaggtaaagctccattagaaggagatgttgtaactaacgctact
caagacttcgatgaaagaggaaagccagcagtagaaatgcaaatgaatgctgaaggtgca
agaaaatggaaagcattaacagctgcaaacgtaggccgtcaggttgctattatccttgat
aactttgtttattctgctccagttgttaatggtgaaattggcggtggtcgctcgagcata
agtggaaacttcactgttgaagaggctcttgaccttgcaaacgtattgaaggctggtaaa
cttcctgccccaacaaatgtaatttcagaagatatcgtaggtgcaaccgtaggttcggaa
gccgctcgtgcaggtattctttcttcaattattggcgtattatttgtattagctttcgta
atgatttattacaacaaagctggtttgattgccaatatcgcccttattgtaaacttattc
ctattattaggtgtaatggcttcatttggtgcaacacttaccctaccaggtattgcaggt
ttagtattatcagtaggtatgtcagtcgatgccaacgtattgatttatgagcgtatcaaa
gaagaattagctttaggtaagacatttgctacggctgttcgtgatggtttccaaaatgca
atgtcatcaattattgactcaaacgttactacgctcattaccggtgcggtattatttatc
tttggttcaggcttaattcttggtttcgctactacgctcttaattggtatttttacttct
ttattctccgctatttttgtatcaagattattatttgaatactacattggtaaaggaaaa
acagtatcattctacacgaaatttactgagaaactattcaaagactcacaattcgatttc
gtttctaagcgtaagttatattacactatctcaagtgccattatcattgcgggtattgtt
tcgatattctttaaaggctttggtttaggtgttgacttcctaggtggtcgtacatacgta
gcaaaatttgaaaaaaccgtaaatactgaagaaatcgacgcagcattgaaaggaactttc
gaaggccaagcaatcgaagtaaaaactttcggtggattcgaccaagtaaaaatcacgact
ccttataaaatcgaaaacacaaatcctgaaattgaaaaacaaatcgaaaacaatgtaaat
aatgctttggccaacgtaaatggcaataaaggcaaaataacaagttcttcgaaagttggt
ccaaccatcgcaaatgatgcaattggcggtgcattaaaagccatattgctttcaatcgca
ttggtatttatctatatctatttacgtttccgtagcttagcatttggttatggtgcattg
gttgccttattccacgatgtggctatcattcttggtattttctcaattttccgcggttgg
cttccattctcgcttgatgttgaccaagcttttgtgggtgcagttctaacaattatgggt
tattcaatgaacgacaccgtagttgtattcgaccgtgtacgtgaatacttacgtgaaaaa
cgtggtgtgagagaagatattcctacagttatcaacaatgccttgaatagtacactgagc
cgtacggcagttactggtttctctactttaatcgtacttttagtgttattgatttttggt
ggtgaaacaattcgtggcttcgtatttgccatgtttgttggggtaatcgttggtacatac
tcttcgttattcgtagcaactccaatcgttgttgatgcgatgcaacgtgatttaaagaat
gaagatgctaaattagctgctgtacccgttgatgctgaggctaaaaaaggtaagaaagct
taa
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