Emticicia oligotrophica: Emtol_3962
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Entry
Emtol_3962 CDS
T02272
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
eol
Emticicia oligotrophica
Brite
KEGG Orthology (KO) [BR:
eol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eol03016
]
Emtol_3962
Enzymes [BR:
eol01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Emtol_3962
Transfer RNA biogenesis [BR:
eol03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Emtol_3962
Prokaryotic type
Emtol_3962
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AFK05088
LinkDB
All DBs
Position
complement(4371668..4372366)
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AA seq
232 aa
AA seq
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MTDERNEVILIDKPLKWTSFDVVNKVRWAGKYKKVGHAGTLDPLATGLLILCTGKMTKQI
DTFQAQEKEYTGTLVLGKTTPSIDLETEFDAEYPIEHINSKTINEVVKQLSGNIEQIPPA
HSAIKIDGKRAYESARKGQEVIIKPRQVEIKEFEVDSTNFPEISFRIVCSKGTYIRSLVR
DFGKLLQSGAYMSSLRRTRIGEFKIENSLTIEQFLESLPEKLSKIENLNKQQ
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgaaagaaatgaagtaattttgattgataaacctttgaaatggacatcattc
gatgttgtgaataaggtaaggtgggctggtaaatataaaaaggttggtcatgcaggaact
ctcgatccattagcaactggcttactcattttgtgtaccggaaaaatgaccaagcaaatt
gatacttttcaggcacaagagaaagaatatacaggaactttagtattgggaaaaacaacg
ccatctattgacttagaaactgagtttgatgcagaatacccaatagaacacattaatagc
aaaactataaacgaggttgtaaaacaactttctggtaatattgaacaaattccgcctgct
cattcggcaattaaaattgatggtaaaagagcctatgaatcagcacgaaaagggcaggaa
gtcattattaaaccccgacaagtagaaatcaaggagtttgaagtagattctaccaatttt
cctgaaatttcttttagaattgtgtgttcgaaaggtacatatattagaagtttagtaaga
gatttcggaaaactacttcaatcaggggcttacatgagttcacttagaagaactcgtatt
ggcgagtttaagattgaaaattcacttacaattgagcagttcttagaaagtttgcccgaa
aaactcagtaaaatcgaaaatttgaacaaacaacagtga
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