Emticicia oligotrophica: Emtol_4063
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Entry
Emtol_4063 CDS
T02272
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
eol
Emticicia oligotrophica
Brite
KEGG Orthology (KO) [BR:
eol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eol03032
]
Emtol_4063
03400 DNA repair and recombination proteins [BR:
eol03400
]
Emtol_4063
Enzymes [BR:
eol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Emtol_4063
DNA replication proteins [BR:
eol03032
]
Prokaryotic type
DNA Topoisomerases
Emtol_4063
DNA repair and recombination proteins [BR:
eol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Emtol_4063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
AFK05188
LinkDB
All DBs
Position
complement(4495053..4497521)
Genome browser
AA seq
822 aa
AA seq
DB search
MSKNLVIVESPAKAKTIEGYLGKDFTVKSSFGHVRDLPDKELGIDVKNQFEPSYIISSDK
TKVINELKKIAKDSETVWLATDDDREGEAISWHLKEALGLNEQTPRIVFREITKKAITTA
IQNPRTINMNLVNAQQARRVLDRLVGFELSPVLWHKIRTGERTNLSAGRVQSVAVRVIVD
REREIDAHDSKSSFKVVAQFIVDKGKVLNAELPKNFETEAEARAFLEKCRNAIFTIKNLE
VKPAKKTPAAPFTTSTLQQEASRKLGFSVLQTMTIAQKLYEAGKISYMRTDSTNLSAEAI
EKAKTQIENAYGEKYVKTRQYKTKSESAQEAHEAIRPTDFATEKVEGDRNEQRLYDLIWK
RSIASQMADAELERTIATIGISTTNEELVATGEVIKFDGFLKVYLESNDDEDEENKGMLP
PLAIGQILDLSIMKATERFSKPPARYTEASLVKKLEEMGIGRPSTYAPTISTIIKRNYVV
KEDRPGKERSFKEFTLQKNEIAERIGKETYGSEKAKLFPTNIGMVVNDFLVDNFDSVIDY
NFTAKVEKDFDVVADGKAQWQTIISNFYKDFHHKIEQASDVKSTQGSRELGIDPKTGKKV
SVKMGKFGPYVQIGDKDDEEKPTFVSLPKGQLMDTLTLEEGLALFDLPKLPKEVGFFEDK
PLIVSVGKFGPYIKHDDKFYNLEKTDDPYLIDAQRAIEIIEAKRNSNDLSQPKDLGIYEG
LAVNIGKGRFGPYVKHGDKYYNIDKKTDPTSLTIDGAIEIIKAKKAAESNKIIKEFPENT
SIQVLNGQYGPYIKAGKRNVKIPKGTDPATLSLEECLKLANG
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatttagtaatagtagaatcacctgcaaaggccaaaaccattgagggttat
cttggaaaagatttcaccgtaaaatctagttttgggcatgtaagagatttacccgataaa
gaattaggaattgatgtaaaaaatcaattcgaaccaagctatattatttcttccgacaag
acaaaagttatcaacgaactaaaaaaaattgctaaagactcagaaactgtgtggttagca
accgatgatgaccgtgaaggagaagcgatttcttggcacttaaaagaagctttgggtttg
aacgaacaaacaccacgcattgtttttcgtgaaattacaaagaaagccatcacaactgct
attcaaaatccaagaacaattaatatgaacttggtaaatgctcaacaagctagaagagtt
ttggatagattagttggttttgaactttcacccgtactatggcataaaattagaactgga
gaacgcacgaatctatctgcaggaagagtacaatcggttgctgtaagagtaattgttgac
cgagagagagaaattgatgcccacgattctaaatcatctttcaaagttgttgcacaattt
attgtagataaaggtaaggtattaaatgccgaattgcctaaaaactttgaaaccgaagcc
gaagcccgtgcttttcttgaaaaatgtagaaatgccatctttactatcaaaaacctagaa
gtaaagccagctaaaaaaacacctgctgcaccgtttacgacatcaactttgcaacaggaa
gcatcgagaaaacttggtttttcagtcttacaaaccatgacaatcgcccagaaactttat
gaagctggtaagatttcatacatgcgtactgactctacaaacctttctgccgaagccatt
gaaaaagcaaaaacacaaattgaaaatgcttacggtgaaaaatacgtaaaaactcgccaa
tacaaaaccaaaagtgaatcggcacaagaagcccatgaggccattcgtccgaccgatttc
gccactgaaaaagttgaaggagaccgcaatgagcaacgtttgtacgacttaatctggaaa
cgctcaattgcctctcaaatggctgatgctgagcttgaaagaacaattgctaccatcggt
atttcaacaaccaatgaagaattggtagcaactggggaagtaattaaattcgatggtttc
ttgaaagtttatcttgaatcgaatgatgatgaagatgaggagaataaaggaatgttaccg
cctttggcaatcggacaaatccttgacctttcaatcatgaaagctactgagcgattctcg
aaaccaccggcaagatatactgaagcaagtttggtgaaaaagctagaggaaatgggcata
ggtcgcccatctacgtacgctcctactatttctactataataaagagaaattatgtagta
aaagaagatcgaccgggaaaggaaagaagcttcaaggaatttactttacaaaagaatgaa
attgcagaaagaattggaaaagaaacttatggttcagaaaaagccaagcttttcccaaca
aatatcggaatggttgtcaatgatttcttagtagataatttcgattctgtcatcgattat
aattttactgcaaaagttgaaaaagattttgatgtcgttgccgacggcaaagctcaatgg
caaaccatcatttcgaatttctacaaagattttcatcataaaatcgagcaagcaagcgat
gtaaaatctactcaaggaagccgagaactcggaattgaccccaaaacgggcaaaaaagta
tcggtaaaaatgggaaaatttgggccttacgtgcaaattggagataaagatgatgaagaa
aaaccaacctttgtaagtttgcctaaaggacaattaatggataccttaactcttgaagaa
ggtttggcattatttgaccttcctaaattacctaaagaagttggtttctttgaagataaa
cctttaatcgtttctgttggtaaatttgggccatatattaaacacgatgacaagttttat
aacttagaaaaaacagatgacccatatctaattgatgctcaaagagctatcgaaattatt
gaagcgaaaagaaatagtaatgatttatcccaacctaaagaccttggtatttacgaagga
ctggcagtgaatattggtaaaggtcgttttggcccttacgtaaaacatggtgataaatat
tataatattgataaaaaaactgaccctacgtcactcacaatcgatggggcaatcgaaata
ataaaggctaaaaaagcagccgaaagtaataaaatcattaaagaatttccagaaaacact
tccattcaagttttaaacggtcaatatggtccgtacattaaagcaggaaaacgaaatgtg
aaaattcctaaaggtaccgaccctgccacactctcacttgaagaatgtttgaaattggct
aatgggtaa
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