Emticicia oligotrophica: Emtol_4100
Help
Entry
Emtol_4100 CDS
T02272
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
eol
Emticicia oligotrophica
Pathway
eol03030
DNA replication
eol03410
Base excision repair
eol03420
Nucleotide excision repair
eol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Emtol_4100
03410 Base excision repair
Emtol_4100
03420 Nucleotide excision repair
Emtol_4100
03440 Homologous recombination
Emtol_4100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eol03032
]
Emtol_4100
03400 DNA repair and recombination proteins [BR:
eol03400
]
Emtol_4100
Enzymes [BR:
eol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Emtol_4100
DNA replication proteins [BR:
eol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Emtol_4100
DNA repair and recombination proteins [BR:
eol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Emtol_4100
NER (nucleotide excision repair)
GGR (global genome repair) factors
Emtol_4100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
AFK05225
LinkDB
All DBs
Position
complement(4537802..4540684)
Genome browser
AA seq
960 aa
AA seq
DB search
MPTKKLFLLDAMALIYRAHFAFMKAPRLTSTGLNTSCVFGVANAILEVIQKEKPTHIGVA
FDLPGGTFRNDWFPEYKANRQEQPEDITIAIPYVKKLVEAMDIPLLMLAGYEADDVIGTL
AKQAAKHDFEVFMMTPDKDYGQLVEDHIYIYKPAIGGKDAEKLGVKEVCEKWGIEHPEQV
VDILGLMGDAVDNIPGVPGVGEKTAAKLIATYGSIENMYENADKLTGKVGEAIKNNKEQA
LLSKKLAQIELNVPVEFNEDFLKITHPKPELMGPLLDELEFRTLRKRLLPNEPVPASSSG
DSSQKSNPSTAPVNALKAKSGTQISMFEAMGAPAAPQIAAQTPFEEEEELQYRANSVKDT
ILSKVHEYHLMDTPILRKSLIQYLSNQEEFCFDSETTSVDAVDAEVVGLSFAYYAGEAFY
VPIPSEKEEAQAVMNEFKEVFENESIIKIGQNIKYDLMVLKNYGIELKGTLFDTMLAHYI
IEPEQRHGMDYLANIYLNYEPVSIETLIGKGKSQGSMRDVALEKIKDYAAEDADITFQLK
HILAPKLADSQQQKLLQQVEMPLVKVLADMEMEGVRVDESALQEMSSVLESDVRQIQSDI
FNIAGQEFNVASPKQLGEILFEKLKLDKNAKKTKTGQYATGEDILSKLENEHEIVRKILD
FRELVKLKNTYVDALPALISKKTGRIHTSYNQAVAATGRLSSTNPNLQNIPIRTPRGREI
RKAFVPRNDEYVILSADYSQIELRIMAAFSGDESMLEAFNQGIDIHSTTASKVFRVGLSD
VTSDMRRKAKMVNFGIIYGISAFGLSQRLNIPRGEAKEIIDAYWVEFPKIKQFMDDTINK
AREVKYAETILGRRRYLRDINSQNMTDRGFAERNAINAPIQGSAADMIKVAMINIHDFMK
KEQLQSRMILQVHDELVFDAHRSEVDFLKTKVDELMCTAIPLTVKMETGMGIGQNWLEAH
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgcccactaaaaaactttttttgttagatgccatggctctcatttacagagctcacttt
gctttcatgaaagcccctcgcctaacatccacaggactgaacacaagctgtgtttttggg
gtagctaatgccatcttagaagttattcaaaaagaaaaaccaacgcatatcggtgttgcc
tttgatttgcccggtggaacctttagaaatgattggtttccagaatacaaagctaatcgt
caagaacaaccagaagatataacgattgctattccttatgtcaaaaagttagttgaagca
atggatattcctttgcttatgcttgcaggctacgaagctgatgacgtaattggaacactt
gccaaacaagcagccaaacacgattttgaggtctttatgatgacccccgataaagattac
gggcaattagtagaagaccatatttatatatacaaacccgcgattggcggaaaagatgcc
gagaaattaggtgtaaaagaagtttgtgaaaagtggggaatcgaacacccagagcaagtt
gtagatattcttggtttgatgggggatgcagttgataacattccgggagtaccaggagtt
ggagaaaaaactgcagcgaagctaattgctacttatggctcaatcgaaaatatgtatgaa
aatgctgataaacttactgggaaagttggtgaagccatcaaaaacaataaagaacaagca
cttttatcgaaaaagttagcccaaattgaacttaatgttccagttgaattcaatgaagat
ttcctaaaaataactcaccccaaacctgaattaatgggtcctcttttggatgaattagag
tttcgtaccttgcgtaaacgcttattaccaaacgagccagttcctgcatcttcctcgggt
gattcaagtcaaaagtctaatccaagcactgcccctgtcaatgcattaaaagcaaaatca
ggtacgcaaatttcgatgttcgaagcaatgggtgcaccagcggcacctcaaatcgctgct
caaactccttttgaggaagaggaagaacttcaatatagagctaattccgtaaaggatacc
attttaagcaaagttcatgagtatcaccttatggatacacctattttgagaaaaagttta
attcaatatttaagtaatcaagaagaattttgcttcgattctgaaactacttctgttgat
gccgtagatgcagaagttgttggattatcgtttgcttattatgctggtgaagcattttat
gttccgattccaagtgaaaaagaagaagctcaagcagtgatgaatgagtttaaggaagta
tttgaaaatgagtcaattattaaaattggacaaaatatcaaatacgatttgatggttttg
aaaaattatggaatcgaactgaaaggtacgttatttgataccatgttggctcattatatc
atcgaacccgaacaacgccacggcatggattatttggctaatatctacttaaactatgag
cctgtttctatcgaaacccttattggtaaaggaaaatctcaaggtagtatgcgtgatgta
gctttagaaaaaattaaagattatgccgcagaagatgcagatattacctttcaattaaag
cacattctggctcctaaattggccgattctcaacagcaaaagcttcttcagcaagtagaa
atgccattggttaaggtattagccgatatggaaatggaaggtgtaagagttgatgagtca
gcacttcaagaaatgtctagtgttcttgaaagtgatgttcgtcaaattcaatccgatatt
ttcaatattgctggacaggaatttaatgtagcttctccaaaacaattaggggaaattctt
tttgaaaaactcaaattagataaaaacgctaaaaaaactaaaacgggtcaatatgctact
ggcgaggatatcctttcgaaattagaaaacgaacacgaaattgttcgtaaaatcctagat
ttcagagagttagtaaaattaaaaaacacttacgttgacgccctcccagccttgatttca
aaaaagactggtagaatacatacctcttataatcaagcagttgcggctacggggcgtttg
agttcaacgaatccaaatttgcaaaacattccgattcgaacaccaagaggccgtgaaatc
agaaaggcttttgtgccacgcaatgatgagtatgttattctttctgccgattattctcaa
attgaattacgtatcatggcagctttcagtggcgatgaaagtatgctcgaggcattcaac
caagggattgatattcactcaacaacagcgtcaaaagtattcagagtgggcctttctgat
gtaacatctgatatgcgtagaaaggccaaaatggtcaattttggcattatttatggaatt
tcggcttttggcttatcgcaaaggctcaatattccccgtggtgaagctaaagaaattatt
gatgcttactgggttgaatttccaaaaatcaaacaatttatggatgataccatcaataaa
gctcgtgaagtgaaatatgccgaaactattttaggtcgtcgtagatatttacgagatatc
aattcacagaacatgaccgaccgaggttttgccgaacgtaatgccatcaatgctccaatt
caaggttcggccgccgatatgattaaagttgctatgataaatattcatgattttatgaaa
aaagagcaactacaatcacgtatgattttacaagtacatgatgaacttgtatttgatgcc
catcgttcggaagtcgatttccttaaaacgaaagttgatgaattaatgtgcacggccatt
ccgcttactgtaaagatggaaacaggcatgggaattggtcaaaattggcttgaagctcac
taa
DBGET
integrated database retrieval system
