Emticicia oligotrophica: Emtol_4183
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Entry
Emtol_4183 CDS
T02272
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
eol
Emticicia oligotrophica
Brite
KEGG Orthology (KO) [BR:
eol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eol03009
]
Emtol_4183
Enzymes [BR:
eol01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Emtol_4183
Ribosome biogenesis [BR:
eol03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Emtol_4183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Met_10
MTS
TRAM
Methyltransf_25
Methyltransf_15
RrnaAD
N6_N4_Mtase
Cons_hypoth95
PCMT
FtsJ
UPF0020
Methyltransf_11
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
AFK05307
LinkDB
All DBs
Position
complement(4642221..4643627)
Genome browser
AA seq
468 aa
AA seq
DB search
MGKQKTFVIESIVVESFAAEGKCIAKHNGQVIFIEGSNVHPGDKVKLFVNNRKKNYAEAN
VLEIIEASPDRIKPFCQHFGVCGGCKWQHVPYEKQLELKWTQVNDQLKRIGKLELPEIKP
ILGSAKTEFYRNKLEYTFSNSRWFTRDEINTEESMDKNALGFHVPKRFEKVLPIEKCFHQ
IDPSNAIRLSLRDFANQQKYTYYDHIAHEGFLRNVMIRTSTTGDLMVMVQFAQNNEEDIK
AVMQHLHQSFPEITSLNYILNQKKNDTFFDLEVKTYYGKPYIEEKMEDLTFRIGVKSFYQ
TNSEQAYELYKITRDLAGLTGNELVYDLYTGTGTIANFVAKKAKKVIGIEYVADAVEDAK
INSGVNQLENTEFYAGDMRKFLTKEFIEQNGKPDVVITDPPRAGMDEPVVRTLMEAAPKR
IVYVSCNPATQARDLAILSEKYHISYVQPVDMFPHTHHVENVVRLDLK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaacaaaaaacatttgtaattgagtcaatagtggttgaaagctttgcagccgaa
ggtaagtgtattgcaaaacacaacggacaagtaatttttatagaaggaagcaatgtgcac
ccaggcgataaagtcaaactttttgtaaataacagaaagaaaaactatgcagaagcaaat
gtgcttgaaataattgaggcatcacccgacagaattaagcctttttgccaacactttggc
gtttgtggaggatgtaaatggcaacatgtaccttatgagaaacagttagaactcaaatgg
acacaggtaaatgaccagttaaaaagaattggcaaactcgaattgccagaaatcaaacca
attttaggttctgcaaaaacagagttttacagaaataaacttgaatatacattttctaat
agtcgctggtttactcgtgatgaaattaacacagaggaatcaatggataaaaatgctttg
ggtttccatgttccaaaaagatttgaaaaggtattgccgattgaaaagtgttttcaccaa
attgatccctcaaatgcaattcgattatctctaagagattttgccaatcaacaaaaatat
acctactacgaccacattgcccatgaaggatttctccgtaacgtgatgattcggacttca
acaacgggcgatttgatggtaatggtacaatttgcccaaaataatgaagaagatataaaa
gctgtgatgcaacacctacatcaaagttttccagaaataacttctttaaattatatttta
aatcaaaagaaaaacgataccttcttcgacttggaagtaaagacctactacggcaagcct
tacattgaagaaaaaatggaagacttaactttcagaataggtgtcaaatcattttatcaa
acaaattctgagcaagcatacgaactttataaaataacaagagatttagctggtttaacg
ggtaatgagttagtctatgacctttatactggaactggaacaattgccaactttgtagct
aaaaaagcaaaaaaagtaatcgggattgaatatgttgccgatgcggtggaagatgcaaaa
ataaattcaggtgtcaatcaattagaaaatactgaattttatgcaggagatatgcgtaag
tttctaactaaagaatttatcgagcagaatggcaaacctgatgttgtaattactgaccct
ccacgtgcgggaatggatgaacctgtagtaagaacattaatggaagcggctcctaaaaga
attgtatatgtaagttgtaatccagcgacccaagcacgagatttagctattttaagcgaa
aaataccatatttcttatgtacaaccagttgatatgtttccccatacgcatcacgttgaa
aatgtagtgagattggatttaaagtaa
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