Emticicia oligotrophica: Emtol_4231
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Entry
Emtol_4231 CDS
T02272
Name
(GenBank) DNA photolyase FAD-binding protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
eol
Emticicia oligotrophica
Brite
KEGG Orthology (KO) [BR:
eol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eol03400
]
Emtol_4231
Enzymes [BR:
eol01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Emtol_4231
DNA repair and recombination proteins [BR:
eol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Emtol_4231
Prokaryotic type
Emtol_4231
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AFK05355
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Position
complement(4703193..4704506)
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AA seq
437 aa
AA seq
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MTKEKIAIFWFRRDLRLNDNAGLYHALRSGYKVLPIFIFDTNILNKLENKQDQRVEFIHH
ALSELQRSLSKLQSSILIKKGEPIEIWKLISEEYEIAEVYTNHDYEKYAIERDKQVGELL
NSKGIAFYTFKDQTIFEKNEVLSGSGTPYTVFTPYSRKWKDTLNEFYLKSYPNEKYFNHF
LGSEILHFPTLEEIGFKESGMNFPKKELREELISKYDQIRDIPSIAGTSRLSVHLRFGTV
SIRELARKAKVLNEKWLNELIWRDFYMNILFHFPHINDGQSFRKEYDNIVWRNNEAEFKK
WCAGKTGYPIVDAGMRELNTTGFMHNRVRMITASFLIKHLLIDWRWGEAYFAQKLLDFDF
SANNGGWQWASSSGCDAAPYFRIFNPTSQTQKFDPELKYIKKWIPELNSFDYPRPIVEHT
FARERVLKAYKEALDKK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagagaaaattgctattttttggtttcgacgtgatttacgtttaaatgataat
gcgggcttgtatcatgctttaagaagtggttataaagttttaccaatatttatttttgat
actaatattcttaataagcttgaaaataaacaagaccaaagagtagaatttatacatcat
gctttatcagaattacaaaggtcattatcaaagcttcaatcttcaattttgattaaaaaa
ggtgaacctatagaaatttggaaattaatttcagaagaatatgaaattgcagaagtatat
accaatcatgactatgagaagtatgcaattgaacgtgacaaacaggtaggcgaattactc
aatagtaaaggtatagccttttatactttcaaagaccaaacaatttttgaaaaaaatgag
gttttgagtggaagcggaactccttacacggtcttcacaccatacagtaggaaatggaaa
gatactttaaatgaattttatttaaaatcttaccctaatgaaaagtacttcaatcatttt
ctaggttcggaaattctccatttcccaactttggaagaaattggttttaaagagtcagga
atgaattttcctaaaaaagaacttcgagaagaactaattagcaaatatgaccaaattcga
gatataccttcaattgcaggaaccagtaggttgagtgttcatttaagatttggtacggtt
agtattagggaattagctcgcaaagctaaagttctcaacgaaaaatggttgaatgaatta
atttggcgagatttttatatgaatattttatttcattttccgcatattaacgatggccaa
tcatttagaaaagagtatgacaatatagtatggagaaataatgaagcggaatttaagaaa
tggtgtgcaggaaaaacaggttatccaattgtagatgctggtatgagagagttgaataca
actggttttatgcataatcgtgttcgtatgattacggctagttttttaattaagcattta
ttgattgattggcgatggggcgaagcttattttgctcaaaaattattagactttgatttc
tctgctaataatggaggctggcaatgggcttctagtagtggatgcgatgcagctccgtat
ttccgaatttttaatcctacttctcaaactcaaaaatttgacccagaattgaagtatatt
aaaaaatggattccagaattaaattcttttgattatccaaggccaatcgttgagcatact
tttgcccgtgagcgagtactgaaagcatataaagaggcccttgataaaaaatag
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