Endosymbiont of Pachyrhynchus infernalis: NARPIN1_00020
Help
Entry
NARPIN1_00020 CDS
T07678
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
eop
Endosymbiont of Pachyrhynchus infernalis
Brite
KEGG Orthology (KO) [BR:
eop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eop03032
]
NARPIN1_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
eop03400
]
NARPIN1_00020 (gyrB)
Enzymes [BR:
eop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NARPIN1_00020 (gyrB)
DNA replication proteins [BR:
eop03032
]
Prokaryotic type
DNA Topoisomerases
NARPIN1_00020 (gyrB)
DNA repair and recombination proteins [BR:
eop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NARPIN1_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
HATPase_c_3
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
BBA84753
UniProt:
A0A2Z5TFN3
LinkDB
All DBs
Position
1173..3572
Genome browser
AA seq
799 aa
AA seq
DB search
MSKYDSSSIKVLKGLDAVKKRPGMYIGNTDDGTGFHHMLFEVIDNSIDEYLAGYCNKISV
CIYKDNSISVEDNGRGIPIDIHKEENISAAELIMTTLHAGGKFDNLSYEISGGLHGVGIS
VVNALSEKLQLIIYRNGYIYEQIYSYGLPKDKIKIIGKSNNNGTFIRFWPDLNIFTNNTN
FQFNLILSRLKEISYLNSNISIQLEDLRKDNSKKIIENNDGIKSFIKDLIKDKDVIHNNI
FYMNSNKNNINVEIALQWINSFQDIVYCFTNNIKQKDGGTHLSGFRSSITKTINNYIEKE
EIYKRSKLNIIGEDTREGLVSVISIKYSSPKFSSQTKDKLISPEIKNVVESLLSDYLMDF
LLENQNDSKLIINKIIQSSKSREAAKKAKETIRKKNNDIFNLLGKLSDCQENNPDLSELY
LVEGDSAGGSAKQGRNRKNQAILPLKGKIINVEKSKIDKILSSQEIVSLITALGCGIENH
NFNIDKIRYKKIIIMTDADIDGSHIRTLLLTFFYRYIPEIINNGYLFIAQPPLYKIKFNK
NEIFIKTHNELIDFKIKLFTKNITLFYDNKSISSIELEEILRLYIDVNNLIIKLKNIYPY
ILLNEILNSEYTINKNDLYNFNKINKWSEDICLNINKQFKFEKCTFNIFNNNNIFEPIFI
INDYLCNEYKIDNCFLESNEYKKILNFIKIKNKIIFDNKSYIKYNNLVKEVNSFKDFINY
IINDSRINIDIQRYKGLGEMNPDQLWYSTMDPNNRTLLKVLVENNNKSDNLFSILMGDNV
ESRKKFIEENSLNVNNLDI
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaatatgattcttcaagtataaaagtattaaaaggattagatgctgtaaaaaaa
cgtcctggaatgtatataggaaatactgatgatggtactggatttcatcatatgttattt
gaagttatagataactctatagatgaatatttagctggatactgtaataaaataagtgta
tgtatatataaagataattctatatcagtagaagataatggtagaggaatacctattgat
atccataaagaagaaaatatatcagcagcagaactaataatgactacattacatgccgga
ggtaaatttgataatttatcatatgaaatatctggaggacttcatggtgtaggaatttca
gttgttaatgcattatcagaaaaattacaattaattatatatagaaatggatatatatat
gaacaaatttatagttatggattacctaaagataaaataaaaataataggtaaatcaaat
aataatggaacttttataagattttggcctgatttaaatatatttacaaataatactaat
tttcaatttaatttaatattaagcagattaaaagaaatatcatatttaaattctaatata
tctatccaattagaagacttaagaaaggataattctaaaaaaataatagaaaataatgat
ggtattaaatcttttataaaagatttaataaaagataaagatgttatacataataatatt
ttttatatgaattcaaataaaaataatattaatgtagaaatagctttacaatggattaat
tcatttcaagatatagtttattgttttacaaataatataaaacaaaaggatggaggtact
catttatctggatttagatcatctataacaaaaactataaataattatatagaaaaagaa
gaaatatataagagaagtaaattaaacataataggagaagatacaagagaaggattagta
tcagtaatatctataaaatattctagtcctaaattttcatctcaaacaaaagacaaatta
atttctccagaaattaaaaatgtagtagaatctttgctaagtgattatttaatggatttt
ttattagaaaatcaaaatgattctaaattaataattaataaaatcatacaatcatcaaaa
tctagagaagctgctaaaaaagcaaaagaaacaataagaaagaaaaataatgatatattt
aatttattaggtaaattgtctgattgtcaagaaaataatcctgatttatcagaattatat
cttgtagaaggtgattcagctggtggatctgcaaaacaaggaagaaatagaaaaaatcaa
gctattttaccattaaaaggaaaaataattaatgtagaaaaatcaaaaatagataaaata
ttatcttcacaagaaattgtttcgttaataactgctttaggatgtggaatagaaaatcat
aattttaatatagataaaataagatataaaaaaataataataatgacagatgcagatata
gatggttctcatataagaacattattattaacattcttttatagatatatacctgaaata
attaataatggatatttatttattgctcaaccgccattatataaaataaaatttaataaa
aatgaaatatttatcaaaacacacaatgaattaatagatttcaaaattaaattatttact
aaaaatataaccttattctatgataataaatccatttcttctatagaattagaagaaata
ttgagattatatatagatgtaaataatttaataattaaattaaaaaacatatatccttat
atattactaaatgaaattttaaatagtgaatatactataaataaaaatgatttatataat
tttaataaaataaataaatggtctgaagatatttgtttaaatataaataaacaattcaag
tttgaaaaatgtacttttaatatattcaataataataatatttttgaaccaatatttatt
attaatgattatttatgtaatgaatataaaatagacaattgttttttagaaagtaatgaa
tataaaaaaatattaaattttattaaaattaaaaataaaataatatttgataataaatca
tatattaaatataataatttagtaaaagaagttaattcttttaaagattttataaattat
ataataaatgattcaagaattaatatagatatacaaagatataaaggattaggagaaatg
aatcctgatcaattatggtactcaacaatggatcctaataatagaactttattgaaagta
ttagtagaaaataataataaatcagataatttattttctatattaatgggtgataatgtt
gaatctagaaaaaaatttatagaagaaaattcattaaatgttaataatcttgatatatag
DBGET
integrated database retrieval system
