Endosymbiont of Pachyrhynchus infernalis: NARPIN1_00260
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Entry
NARPIN1_00260 CDS
T07678
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
eop
Endosymbiont of Pachyrhynchus infernalis
Pathway
eop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NARPIN1_00260 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eop03019
]
NARPIN1_00260 (groL)
03110 Chaperones and folding catalysts [BR:
eop03110
]
NARPIN1_00260 (groL)
03029 Mitochondrial biogenesis [BR:
eop03029
]
NARPIN1_00260 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eop04147
]
NARPIN1_00260 (groL)
Enzymes [BR:
eop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NARPIN1_00260 (groL)
Messenger RNA biogenesis [BR:
eop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NARPIN1_00260 (groL)
Chaperones and folding catalysts [BR:
eop03110
]
Heat shock proteins
HSP60 / Chaperonin
NARPIN1_00260 (groL)
Mitochondrial biogenesis [BR:
eop03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NARPIN1_00260 (groL)
Exosome [BR:
eop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NARPIN1_00260 (groL)
Exosomal proteins of other body fluids (saliva and urine)
NARPIN1_00260 (groL)
Exosomal proteins of breast cancer cells
NARPIN1_00260 (groL)
Exosomal proteins of colorectal cancer cells
NARPIN1_00260 (groL)
Exosomal proteins of bladder cancer cells
NARPIN1_00260 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BBA84772
LinkDB
All DBs
Position
complement(29779..31419)
Genome browser
AA seq
546 aa
AA seq
DB search
MTAKDVKFGNDARTKMLKGVNILADAVKVTLGPKGRNVVLDKSFGAPIITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDSAGDGTTTATLLAQSIINEGLKAVAAGMNPMDIKRGI
DKAVIQAVNVLKSISVACSDSKSIEQVGTISANSDEKVGKLIAEAMEKVGKEGVITVEEG
SGLEDELDVVEGMQFDRGYLSPYFINKPESGVVELENPFILLVDKKISNIRELLPILENV
AKSNKPILIIAEDIEGEALATLVVNTMRGIVKAVAVKAPGFGDRRKAMLEDIAILTSGSV
ISEDIGLELEKTKINDMGQAKKIIVNKDTTTIIDGIGSKISIEKRVSQISKQKEDSTSDY
DKEKLQERIAKLAGGVAVIKVGAATEIEMKEKKSRVEDALNATRAAVEEGVVAGGGVALI
RVANSIKNLKGDNEDQNVGIKVAIKSMETPLKQIVSNAGEESSVIANNVKLKSGNYGYNA
STEKYGDMIDMGILDPTKVTRSALQYAASIAGLMITTECMITELLKDDNKQDINSSNMNN
IGGNMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgacagctaaagatgttaaatttggtaacgatgctagaacaaaaatgttaaaaggtgtt
aatattttagctgatgctgtaaaagttactcttggcccaaaaggaagaaatgttgtttta
gataaatcttttggagctccaattataactaaggatggagtttctgtagctagagaaata
gaattagaagataaatttgaaaatatgggagctcaaatggttaaagaagtggcttcaaaa
gctaatgattcagcaggagatggaactactacagctacattattagcacagtctataatt
aatgaaggattaaaagcagttgctgctggaatgaatcctatggatataaaaagaggaata
gataaagcagttattcaagccgtaaatgttttaaaaagtatatctgtagcatgttctgat
tccaaatctatagaacaagttggtacaatatctgctaattctgatgaaaaagttggtaaa
ttaatagcagaagctatggaaaaagttggtaaagaaggtgttataactgttgaagaagga
tcgggattagaagatgaattagatgtggtagaaggaatgcaatttgatagaggttattta
tctccttattttataaataaacctgaatctggagtagttgaattagaaaatccttttata
ttattagtagataaaaaaatatctaatataagagaattattacctatattagaaaatgtt
gctaaatctaataaacctattttaataatagctgaagatatagaaggggaagctttagca
accttagttgttaatacaatgagaggaatagttaaagctgttgctgttaaagcaccagga
tttggtgatagaagaaaagctatgttagaagatatagcaatattaacatcaggatctgtt
atttctgaagatataggattagaattagaaaaaacaaaaataaatgatatgggacaagca
aaaaaaataatagttaataaagatacaactactataatagatggtattggaagtaaaatt
tctatagaaaaaagagtatctcaaataagtaaacaaaaagaagattctacttctgattat
gataaagaaaaattacaagaaagaatagctaaattagctggaggtgtagctgttattaaa
gttggagctgctactgaaatagaaatgaaagaaaaaaaatctagagttgaagatgcttta
aatgctactagagcagcagttgaagaaggtgttgttgctggaggtggtgtagctttaata
agagttgcaaatagtataaaaaatttaaaaggtgataatgaagatcaaaatgttggaata
aaagttgctataaaatctatggaaactccattaaaacaaattgtttctaatgctggagaa
gaatcttctgtaatagcaaataatgtaaaattaaaatctggtaattatggatataatgct
tctacagaaaaatatggagatatgattgatatgggtatattagatccaacaaaagttaca
cgttctgctttacaatatgcagcttcaatagctggattgatgataactacagaatgtatg
ataacagaattattaaaagatgataataaacaagatattaattcatcaaatatgaataat
attggtggaaatatgatgtaa
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