Endosymbiont of Pachyrhynchus infernalis: NARPIN1_01240
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Entry
NARPIN1_01240 CDS
T07678
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
eop
Endosymbiont of Pachyrhynchus infernalis
Pathway
eop03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eop00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NARPIN1_01240 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eop03021
]
NARPIN1_01240 (rpoA)
03400 DNA repair and recombination proteins [BR:
eop03400
]
NARPIN1_01240 (rpoA)
Enzymes [BR:
eop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NARPIN1_01240 (rpoA)
Transcription machinery [BR:
eop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NARPIN1_01240 (rpoA)
DNA repair and recombination proteins [BR:
eop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NARPIN1_01240 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
BBA84856
UniProt:
A0A2Z5T837
LinkDB
All DBs
Position
114404..115375
Genome browser
AA seq
323 aa
AA seq
DB search
MIKNLLKPKLYIENIGNNKSNIIIYPLERGFGHTIGNSLRRVLLSYIPGFAITEVEIEGI
IHEYEGKKGVKEDIVNILLNIKDLSIGIINEDIDSELLVINKNEIGPVTANDIKPNNNIK
IFNKDHIICNITSNLINLNINMKLQRGIGYNPFNILKKNKNDNNTIIGKLFIDANFNPIK
KVSYNIEATRVENKTDLDKLIIYLETNGSVDSEYVIKMASNILIDQFNVLLLNNKDELIV
KNETNNYTNSNKLDDKILLKSIDDLELTIRSLNCLKSESIFCIKDLIIKSEDELLKISNL
GKKSLSEIKNILNTLNLKLGTKI
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaatttattaaaacctaagttatatatagaaaatattggtaataacaaatct
aatattattatatatcctttagaaagaggatttggtcatactataggtaattcattaaga
agagtattactatcttatatacctggatttgctataacagaagttgaaatagaaggtatt
attcatgaatatgaaggtaaaaaaggagttaaagaagatatagttaatatattattaaat
ataaaagatttatctataggaataataaatgaagatatagatagtgaattattagtaata
aataaaaatgaaataggtcctgtaacagcaaatgatattaaacctaataataatataaaa
atatttaataaagatcatattatatgcaatataacaagtaatttaataaatttaaatatt
aatatgaaattacaaagaggtattggatataatccatttaatattttaaaaaaaaataaa
aatgataataatactattataggtaaattatttatagatgctaattttaaccctattaaa
aaagtatcttataatatagaagctactagagtagaaaataaaacagatttagataaatta
attatatatttagaaactaatggatcagttgattctgaatatgttataaaaatggcatct
aatattttaatagatcaatttaacgttttattattaaataataaagatgaattaattgta
aaaaatgaaacaaataattatactaactctaataaattagatgataaaattttattaaaa
tcaatagatgatttagaattaacaattagatccttaaattgtttaaaatcagaatctata
ttttgtataaaagatttaattataaaaagtgaagatgaattattaaaaatatctaattta
ggtaaaaaatctttatctgaaataaaaaatatattaaatactttaaatttaaaattagga
acaaaaatttaa
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