Endosymbiont of Pachyrhynchus infernalis: NARPIN1_02030
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Entry
NARPIN1_02030 CDS
T07678
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
eop
Endosymbiont of Pachyrhynchus infernalis
Pathway
eop03030
DNA replication
eop03430
Mismatch repair
eop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NARPIN1_02030 (dnaX)
03430 Mismatch repair
NARPIN1_02030 (dnaX)
03440 Homologous recombination
NARPIN1_02030 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eop03032
]
NARPIN1_02030 (dnaX)
03400 DNA repair and recombination proteins [BR:
eop03400
]
NARPIN1_02030 (dnaX)
Enzymes [BR:
eop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NARPIN1_02030 (dnaX)
DNA replication proteins [BR:
eop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NARPIN1_02030 (dnaX)
DNA repair and recombination proteins [BR:
eop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NARPIN1_02030 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
RuvB_N
DNA_pol3_gamma3
RCF1-5-like_lid
AAA_7
TIP49
AAA_22
ResIII
AAA_5
AAA_assoc_2
AAA_18
Parvo_NS1
Sigma54_activat
TsaE
AAA_16
AAA_24
Motif
Other DBs
NCBI-ProteinID:
BBA84922
LinkDB
All DBs
Position
184836..185954
Genome browser
AA seq
372 aa
AA seq
DB search
MSNFSLKWRPKKFSEIVGQNNVINSIINSFKYNRIHNSYLIYGPYGTGKTSIARLISKGL
NCDEYIKSCLNINYNFPCNKCNNCLLMENNKFIDFIEIDASLKTKVEDIRDLLDNINYLP
YYGLNKIYLIDEIHTISKLSFSTLLKSLEEPPINTIFILVTTEINKIPNTILSRCFKLNL
NKLDNNLIINRLCYISNIEKISFEQNVLYYISDIANGSLRDSLNILEQLSIVSKNNIKLE
LISNLFNICNLDILINLIEYIIYNDLNKLLIELYNFSLINLDYNFIINKLLIIIHYIFMI
NFNKNYYLDSIFNNKKNTLIKLSNNISIEKIELFYSLLIELKEKLIYYYNYKIAFEAYII
KIFYNINNKLNK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatttttcattaaaatggagacctaaaaaattttcagaaattgtaggtcaaaat
aatgtaataaattctataataaatagttttaaatataatagaatacataattcttactta
atatatggaccatatggtactggtaaaacatcaatagctagattgatatccaaaggttta
aattgtgatgaatatataaaatcttgtttaaatataaattataattttccatgtaataaa
tgtaataattgtcttttgatggaaaataataaatttatagattttattgaaattgatgca
tctcttaaaactaaagtagaagatataagagatttgttagataatataaattatttacct
tattatggattaaataaaatttatttaatagatgaaattcatactatatctaaattaagt
tttagtacattattaaaatctttagaagaacctcctattaatactatatttatacttgtt
actactgaaataaataaaatacctaatactattttatctcgttgttttaaattaaattta
aataaattagataataatttaattataaacagattatgttatatatccaatatagaaaaa
ataagttttgaacaaaatgttttatattatatatctgatattgctaacggaagtttaaga
gattcattaaatatattagaacaattatctatagtaagtaaaaataatattaaattagaa
ttaattagtaatttatttaatatatgtaatttagatatactaataaatttaattgaatat
attatttataatgatttaaataaattattaatagaattatataatttttctttaattaat
ttagattataattttataattaataaattgttaattattattcattatatttttatgatt
aattttaataaaaattattatttagattcaatatttaataataaaaaaaatactttaatt
aaattatcaaataatatatctatagaaaaaatagaattattttatagtttacttatagaa
ttaaaagaaaaattaatttattattataattataaaatagcatttgaagcatatataatt
aaaatattttataatataaataataaattaaataaataa
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