Endosymbiont of Rhynchophorus ferrugineus: NARRFE1_00310
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Entry
NARRFE1_00310 CDS
T07618
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
eor
Endosymbiont of Rhynchophorus ferrugineus
Pathway
eor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NARRFE1_00310 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eor03019
]
NARRFE1_00310 (pnp)
03016 Transfer RNA biogenesis [BR:
eor03016
]
NARRFE1_00310 (pnp)
Enzymes [BR:
eor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NARRFE1_00310 (pnp)
Messenger RNA biogenesis [BR:
eor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NARRFE1_00310 (pnp)
Transfer RNA biogenesis [BR:
eor03016
]
Prokaryotic type
tRNA degradation factors
NARRFE1_00310 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
KH-I_KHDC4-BBP
S1
Motif
Other DBs
NCBI-ProteinID:
BBA84991
UniProt:
A0A2Z5T3L4
LinkDB
All DBs
Position
complement(32735..34807)
Genome browser
AA seq
690 aa
AA seq
DB search
MINKKIIHEFNYNNKKIKIETGLICRNSSSSVFISINDTKVIISILEIEKKKNNDFFPLT
VNYYERSYSLGKFPNNALNREIRQNENEILISRLIDRSIRPSLTNITNYNNELYITVIAL
SMEEDVNPDIISIIGVSSALSILINNFDPIFCIRLSIDKNNKFIINPNISLYEKNDLNII
ISGNENSITMIESKSNLIDYNIILDSIDFSINNSKLIIYNIKEFVYKYYKNNNINKKKYN
ISNIYKDFYLKNIVYNLTNKKINNLFNIKNKNNRILEINNIKKKLLLDINNILSSNYNED
DILKYLNKNIKEKFRYFIYKNSIRLDNRKYNEIRDINVIFNILPKTHSSCLFIKENTQSL
ITITLGNDNKNISLKNKNFIFHYNFLNYCFGEIGFLSFPKRREIGHGKLAYNSIFPIIPE
SNNFPYTIRLVSEIFESDGSSSMASVCGASLALMNLGISKEHIAGVAMGLIFIDNNEYII
LSDITGEEDNYGDMDMKISGNCNYISALQMDVKICNNINVDLIRNVFFEAKKSIKNILEK
MNYKISKPNKISKNLPIFKIIKIDVNYIKNIIGKGGNVIKKIINETNSEIDIDNDGTIKI
LSNNKEKLNLTLEKINNLLFIPKIGDIYFGKIIKKNNKGIILYIKKINKQFFVNYNIKNN
NFNINEEVKVKIININNNKKIIFNILKNEK
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
ttgataaataaaaaaataatacatgaatttaattataataataaaaaaataaaaatagaa
acaggattaatatgtagaaattcttcatcttctgtttttataagtataaatgatacaaaa
gttataatttctatattagaaatagaaaaaaaaaaaaataatgatttttttccattaaca
gttaattattatgaaagatcatattcattaggaaaatttcctaataatgcattaaataga
gaaataagacaaaatgaaaatgaaatattaatatctagattaatagatagatctataaga
ccttcattaacaaatataactaattataataatgaattatatataactgttattgcttta
tcaatggaagaggatgttaatcctgatattatatctataataggagtttcttcagcatta
agtattttaataaataattttgatcctatattttgtattagattatctattgataaaaat
aataaatttataataaatccaaatataagtttatatgaaaaaaatgatttaaatattata
atatcaggtaatgaaaactctataactatgatagaatctaaatcaaatctaattgattat
aatataatattagattctatagatttttctataaataattctaaattaataatatataat
ataaaagaatttgtatataaatattataagaataataatataaataaaaaaaaatataat
attagtaacatatataaagatttttatttaaaaaatattgtatataatttaacaaataag
aaaattaataatttatttaatataaaaaataaaaataatagaatattagaaataaataat
ataaaaaaaaaattattattagatataaataatattttatcttcaaattataatgaagat
gatattctaaaatacttaaataaaaatataaaagaaaaatttagatattttatatataaa
aattctataagattagataatagaaaatataatgaaataagagatataaatgtaatattt
aatatattacctaaaacacatagttcatgtttatttattaaagaaaatactcaatcatta
attactataacattaggtaatgataataaaaatatttctttaaaaaataaaaattttatt
tttcattataattttttaaattattgttttggagaaattggttttttaagctttcctaaa
agaagagaaataggacatggaaaattagcatacaattctatttttcctataataccagaa
agtaataattttccatatactataagattggtatcagaaatatttgaatcagatggatct
tcatctatggcatctgtttgtggagcttctttagctcttatgaatttaggaatatccaaa
gaacatattgctggagttgctatgggattaatatttatagataataatgaatatataata
ttatcagatataacaggtgaagaagataattatggagatatggatatgaaaatatctggt
aattgtaattatataagtgctttacaaatggatgtaaaaatatgtaataatataaatgta
gatttaattagaaatgtattttttgaagccaaaaaatctattaagaatatattagaaaaa
atgaattataagatatctaagcctaataaaatatcaaaaaatttacctatatttaaaata
ataaaaattgatgttaattatataaaaaatataattggcaaaggcggtaatgtaataaaa
aaaataataaatgaaacaaattctgaaatagatattgataatgatggaacaataaaaata
ttgtcaaataataaggaaaaattaaatttaactttagaaaaaataaataatttattattt
ataccaaaaataggagatatatattttggtaaaataataaaaaaaaataataaaggaatt
attttatatataaaaaaaataaataaacaattttttgtaaattataacataaaaaataat
aattttaatataaatgaagaagtaaaagttaaaattattaatataaacaataataaaaaa
attatatttaatatattaaaaaatgaaaaataa
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