Endosymbiont of Rhynchophorus ferrugineus: NARRFE1_00500
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Entry
NARRFE1_00500 CDS
T07618
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
eor
Endosymbiont of Rhynchophorus ferrugineus
Pathway
eor03030
DNA replication
eor03430
Mismatch repair
eor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NARRFE1_00500 (dnaQ)
03430 Mismatch repair
NARRFE1_00500 (dnaQ)
03440 Homologous recombination
NARRFE1_00500 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eor03032
]
NARRFE1_00500 (dnaQ)
03400 DNA repair and recombination proteins [BR:
eor03400
]
NARRFE1_00500 (dnaQ)
Enzymes [BR:
eor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NARRFE1_00500 (dnaQ)
DNA replication proteins [BR:
eor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NARRFE1_00500 (dnaQ)
DNA repair and recombination proteins [BR:
eor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NARRFE1_00500 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BBA85007
UniProt:
A0A2Z5T3N3
LinkDB
All DBs
Position
48422..49126
Genome browser
AA seq
234 aa
AA seq
DB search
MNKIQIVLDIETTGINKNGPHYLNHKIIEIAAIKIINRKITKDVFHVFINPNRNIDIEAY
NIHKISNNFLKKKPIFYNIANNLINFIKGHDLIIHNSKFDIGFINYELKLINYNIKIENI
CNIIDTLSISRKIFPCKKNNLDDLSIRLNINKKKRNKHSALNDVIILVNIYLKLTSKQLR
IDFNKNLFYNNNIKYNNLLNSSFYNNKKLKIIFANNKEINNNNIFLNLIIKKYK
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaattcaaatagtattagatatagaaactactggaataaataaaaatggtcct
cattatttaaatcataaaataatagaaattgcagcaattaaaataataaataggaaaatt
actaaggatgtatttcatgtatttataaatcctaatagaaatatagatatagaagcttat
aatattcataaaataagtaataattttttaaaaaaaaaacctatattttataatatagct
aataatttgataaattttataaaaggacatgatttaataatacataattctaaatttgat
ataggttttataaattatgaattaaaattaattaattataatattaaaatagaaaatata
tgtaatataatagatacactaagtatatctagaaaaatatttccatgtaaaaaaaataat
ttagatgatttatctataagattaaatataaataaaaaaaaaagaaataaacatagtgca
ttgaatgatgtaattattttagttaatatatatttaaagttaactagtaaacaattaaga
atagactttaataaaaatttattctataataataatattaaatacaataatttattaaat
agtagtttttataataataaaaaacttaaaattatatttgctaataataaagaaattaat
aataataacatatttttaaatcttataataaaaaaatataaataa
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