Endosymbiont of Rhynchophorus ferrugineus: NARRFE1_01250
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Entry
NARRFE1_01250 CDS
T07618
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
eor
Endosymbiont of Rhynchophorus ferrugineus
Pathway
eor03030
DNA replication
eor03430
Mismatch repair
eor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NARRFE1_01250 (ssb)
03430 Mismatch repair
NARRFE1_01250 (ssb)
03440 Homologous recombination
NARRFE1_01250 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eor03032
]
NARRFE1_01250 (ssb)
03400 DNA repair and recombination proteins [BR:
eor03400
]
NARRFE1_01250 (ssb)
03029 Mitochondrial biogenesis [BR:
eor03029
]
NARRFE1_01250 (ssb)
DNA replication proteins [BR:
eor03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NARRFE1_01250 (ssb)
DNA repair and recombination proteins [BR:
eor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
NARRFE1_01250 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
NARRFE1_01250 (ssb)
Mitochondrial biogenesis [BR:
eor03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
NARRFE1_01250 (ssb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSB
OSB_SSB
DUF3127
tRNA_anti-codon
SSB_1
Motif
Other DBs
NCBI-ProteinID:
BBA85067
UniProt:
A0A2Z5T3U8
LinkDB
All DBs
Position
113342..113860
Genome browser
AA seq
172 aa
AA seq
DB search
MASKGINKVILIGNIGQDPEVRYTSNGNAITTVNLATSDKWKDKQTGDFKEKTEWHRIVF
FGKLAEISGEYLKKGSQIYIEGQLQTRKWKDQNDNNKYITEVVVSARGTLKILSSKNFNK
NSNYNTNNKKINVNEFEKSENSLKNKNENNSNEENDISDDISDDFEDDDIQF
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaaaggaataaataaagttatattaattggtaatattggacaagatcctgaa
gttagatatacatcaaatggtaatgctataacaactgttaatttagctacttcagataaa
tggaaagataaacaaactggtgattttaaagaaaaaactgaatggcatagaatagttttt
tttggtaaattagcagaaatatctggagaatatttaaaaaaaggttctcaaatttatata
gaaggacaattacaaacaagaaaatggaaagatcaaaatgataataataaatatataaca
gaagttgtagttagtgctagaggaacattaaaaatattaagtagtaaaaattttaataaa
aattctaattataatacaaataataaaaaaataaatgttaatgaatttgaaaaatcagaa
aatagtttaaaaaataaaaatgaaaataatagtaatgaagaaaatgatatttcagatgat
ataagtgatgattttgaagatgatgatatacaattttaa
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