KEGG   Endosymbiont of Rhynchophorus ferrugineus: NARRFE1_01800
Entry
NARRFE1_01800     CDS       T07618                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
eor  Endosymbiont of Rhynchophorus ferrugineus
Pathway
eor03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:eor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NARRFE1_01800 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eor03021]
    NARRFE1_01800 (rpoA)
   03400 DNA repair and recombination proteins [BR:eor03400]
    NARRFE1_01800 (rpoA)
Enzymes [BR:eor01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     NARRFE1_01800 (rpoA)
Transcription machinery [BR:eor03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     NARRFE1_01800 (rpoA)
DNA repair and recombination proteins [BR:eor03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      NARRFE1_01800 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD DUF3517
Other DBs
NCBI-ProteinID: BBA85115
UniProt: A0A2Z5T7X2
LinkDB
Position
153018..154103
AA seq 361 aa
MFKLINSFLKPNIVNIEKVNKFHSKITLEPMEKGFGNTIGNSLRRILLSSIPGYKITEVE
IDGVYHEYGVINGIREDILEIILNIKNIPIKIINDFDFEYINIKNVKSGIIKSKDILCND
NIIIIDPDYYLFTINDNIFINMKMKVQKGIGYLYNSSYDKKNNLGKILIDTHFSPINKVL
YYVENTRINNKIDLDKLIIEIETNGTIEAEESIKIAANILINQLNIFLDLNKFNNNFNNT
NNNKSLNKEVISNEIKDFNKNFFIELIELYKEFNVNPIFFKKINNLNLTVRSLNCLKNDN
ILYIGHLVQIKEQDLLKISNLGKKSLIEIKNSLKNLNLKFDTYIKDWDKMFSSFLKIINK
K
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgtttaaattaataaattcttttttaaaacctaatattgtaaatatagaaaaggttaat
aaatttcattctaaaataacattagaaccaatggaaaaaggttttggtaatactattggt
aattctttaagaagaattttattgtcatctatacctggttataaaataactgaagttgaa
attgatggagtctatcatgaatatggtgtgataaatggtataagagaagatatactagaa
attatattaaatataaaaaatattcctattaaaattataaatgattttgattttgaatat
ataaatataaaaaatgtaaaatcaggtataataaaatctaaagatatattatgtaatgat
aatattattattattgatcctgattattatttatttactattaatgataatatttttatt
aatatgaaaatgaaagttcagaaaggtataggttatttatataatagttcttatgataaa
aaaaataatttaggaaaaattttaatagatacacactttagtccaataaataaagtttta
tattatgtagaaaatactagaataaataataaaatagatttagataaattaataatagaa
atagagactaatggaactatagaagctgaagaatctattaaaatagctgctaatatatta
ataaatcaactaaatatatttttagatttaaataaatttaataataattttaataacaca
aataataataaatctttaaataaagaagttattagtaatgaaattaaagattttaataaa
aatttttttattgaattaatagaattgtataaagaatttaatgtaaaccctatatttttt
aaaaaaataaataatttaaatttaacagttagatcattaaattgtttaaaaaatgataat
atattatatataggacatttagttcaaataaaagaacaagatttattaaaaatttctaat
ttaggtaaaaaatcattaattgaaattaaaaatagtttaaaaaatttaaatttaaaattt
gatacttatataaaagattgggataaaatgttttctagttttttaaaaataataaataaa
aaataa

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