KEGG   Exaiptasia diaphana (Aiptasia): 110231240
Entry
110231240         CDS       T05080                                 
Name
(RefSeq) symplekin
  KO
K06100  symplekin
Organism
epa  Exaiptasia diaphana (Aiptasia)
Pathway
epa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:epa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110231240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:epa03021]
    110231240
   03019 Messenger RNA biogenesis [BR:epa03019]
    110231240
Transcription machinery [BR:epa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     110231240
Messenger RNA biogenesis [BR:epa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     110231240
    U7-dependent histone pre-mRNA processing factors
     110231240
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N Cnd1
Other DBs
NCBI-GeneID: 110231240
NCBI-ProteinID: XP_020891893
UniProt: A0A913WNZ0
LinkDB
Position
Unknown
AA seq 1201 aa
MAAGVRGEVKNLTRLSEASQFFSHEETGEAETTDVPVEVTTEDSTTDKVIDLLNQAQLEK
EGKLNCLKQVQEFIVQKDPSLLDNFLDEILVFQQDKSADVRKFVVGFVEEACKKDVELLG
KVLGNLVFMLNDENVAVQKRVMLCFTQLYKYALQYICKKRVISEELENMWEVLTEIKNQI
ISMLDSDNDGIRTHAIKFMEMLVLVQSNKTQDSESTKKGETDISLDVIPRNHPLVRMAEL
REEGGTTLEALLTLIASPTISSVNLMACLGTLSNIARQRPIFMSTVVQTFESLHANLPTS
LSKSQVSSVRKNLKLHLMNLLRHPCSIEFLPQITTLLTDLGASQTELQKNMPKTTSESMK
RRAENEASSGNKKSKLTDADDPDVISMSTAEAIDVTAQDLIPLLDKDNVTNLVLISMLSL
PDHIPTNFSDTYTPIAAAGGQAQVAHLARLLASQMTAAGVGVGFERMDALKKAQDPRVRL
KGQNESNQSIPVIGSSWSADADAEFSGEKKDSALQRILSGQIDVSKDKVKPEGKKTFQHK
EAPIPPLRMRRIKAFKLAEVTKDMNHTEQQNMLMSTIDRIIKAENSATRSGVTQERIKLL
VGLAIQCEDPARQELHNYIQEDPRAHYDLIHTWLYQEYLMQEVKMEEGFPVDMMSYDHCL
CTILEGLQHRMDPKDKLFTRVVLEAPLVTERVMEMVKLHCENIETLHVGFATLRDLILKR
PASQHEHLQTLLELTTNEKEQVRVQAIHSAKKLHTRPDLALDIETFALSSLELLIQEKQP
SEPDEEPKEWTDESIKTCLYLYLALLPQNHKLFHQLAIIYTASSQMIKRIILRHLETPVR
AIGMASPELLQLVESCPTGSETLIARILNIITDKAAPSPDLVKRVKDLYHKRVADVRFLI
PVLTGLEKQEIIAVLPKLIKQSPSVVKEVFNRLLGCFHSEGKVSGTSPLSPSELLVALHM
IEPSKKANTLESKGDIRSVMKAIRFCFDEKTIYTQEVLAIVLQQLMEINPLPTLFMRTVI
QSLSICPRLIGFVMSLLSKLITKQVWKQPKVWQGFVKCCQMTKPQSFSVLLQLPPRQLES
AFEICPELRDNVVNHVQSFTPHQRAHIPRSVLQILDKEKKTETDQADKEQVDPKQETESK
TEEIPSSPKRSRSSSKERRKDRKRSRRSRSGSPHSKREHTEEGSESEGEIEDTESDTLHV
K
NT seq 3606 nt   +upstreamnt  +downstreamnt
atggcggctggagttcgtggcgaagtgaaaaatctaacccggctttctgaggcttcacag
ttcttcagccatgaagaaacaggagaggcagaaacgacagatgttcctgttgaagttaca
accgaggattcaacaacagataaggttattgatctcttgaatcaagcacaacttgagaaa
gaagggaaactgaattgtttgaaacaagtccaggaatttattgtgcaaaaagacccatct
cttctagacaactttttagatgaaattttggtatttcaacaagacaagtctgctgatgtc
agaaagtttgtagttggtttcgttgaagaagcttgcaaaaaggatgttgaacttcttggg
aaagttttgggaaaccttgtgtttatgttgaatgatgaaaatgttgcagttcaaaagaga
gtcatgttatgttttacacaattgtacaagtatgctttgcagtatatatgcaagaaaaga
gtaatatcagaagagcttgaaaacatgtgggaggtccttacagagattaagaatcagatc
atttcaatgttggactctgataatgatggaattcgaacacatgccataaagtttatggag
atgcttgttcttgttcagtctaacaaaacacaagattctgagtctacaaagaaaggtgaa
acagacatttctcttgatgtcattccacgaaaccatcctcttgtcagaatggcagagcta
agagaagaaggtggtacaacactagaagctttgctgactttgatagcatcaccaacaata
tcaagtgtaaacttaatggcatgtttgggtactctatcaaatattgctcgacagcgtcca
atttttatgtcaactgttgtacaaacttttgaatcattacatgcaaatctccctacttca
ttgtcaaaatcacaagttagtagtgtcaggaaaaaccttaagctacatctaatgaatctt
ttaagacatccatgttcaattgaatttcttcctcaaattaccaccttgctaactgacctt
ggagcttcacagacagagctccaaaaaaacatgcctaaaactacttcagagtcaatgaaa
aggagggcagaaaatgaagcttcatcagggaacaagaaatccaagttgactgatgctgat
gatccagacgtgatatcaatgtctacggcagaggcgattgacgtgactgcacaagacctc
attcctttacttgacaaagataatgtcaccaatcttgttctgataagcatgctgtcactt
cctgatcatatcccaacaaactttagcgatacatacactcctattgctgctgctggtggc
caagctcaggtagctcacttagcaagactgcttgcatctcaaatgactgctgctggtgtt
ggtgttggctttgaaagaatggatgcactcaagaaggcacaagacccccgtgtacggtta
aaaggtcaaaatgaatccaaccagtctattcctgtgattggttcaagttggtctgctgat
gccgatgcagagttttcaggggagaaaaaagattcagcattacaaagaatcctgagtgga
caaattgatgtttcaaaagacaaagtaaaaccagaaggcaaaaaaacttttcaacataaa
gaagctccaatccctcctttgcgaatgcgtaggattaaagcctttaaattagccgaggtc
acaaaagacatgaatcacacagaacaacagaacatgcttatgagcaccattgataggatt
atcaaagctgaaaacagtgcaactaggagtggagttactcaggaaagaattaaacttctt
gttggattggccattcagtgtgaagaccctgctagacaagaacttcacaattatatccaa
gaagaccccagagcccactatgacttgatacacacatggctgtatcaggagtatttgatg
caggaggttaagatggaggaaggttttccagtagatatgatgtcatatgaccactgcttg
tgtacaatattagaaggattgcaacaccgcatggatccaaaggacaagttgtttacacgt
gttgtccttgaggctccccttgtcactgaaagagttatggaaatggtaaagctacattgt
gaaaatatagaaaccctccatgttggttttgcaacattaagagatttaatcctcaagcga
ccagcttcccaacatgaacacttacaaacattacttgagctgactactaacgagaaggaa
caggtccgtgtgcaggccatccactctgctaaaaagctacatactcgacctgatcttgct
ctggatattgagacatttgcattgtcctcattggaattactaatacaagaaaagcaacct
tcagagccagatgaagaaccaaaggagtggacagatgaaagcataaaaacttgtttatat
ttatatctagcattattacctcaaaatcacaaactatttcatcagttggcaattatctat
actgcgtcatctcaaatgattaaaagaatcatacttcgccatcttgaaacaccagtccgt
gctattggaatggcttctcctgagttactgcagttggtagagagctgtcctactggatct
gaaacacttatcgccagaatattaaacattatcacagataaagctgctccatcacctgat
ctcgtcaaacgagttaaagatctttatcataagcgcgttgccgatgtacgattcctgatc
cctgtactgacaggacttgaaaaacaggaaatcattgctgtattgcctaaactcataaaa
caatcaccaagcgtcgtgaaagaagtgtttaatagactgttgggatgttttcatagtgag
ggaaaagtgtcaggcaccagtcctcttagtccatcagaactgttagttgctctccatatg
attgaaccttcaaagaaagccaacactcttgagtctaaaggagacatacgttctgttatg
aaggccatcaggttctgttttgacgagaaaactatttatacacaagaagtactggctatc
gtccttcagcagctgatggaaatcaatcctctcccaacattgttcatgagaacggtaatc
cagtcgcttagtatttgcccaagacttatcggattcgtcatgagtttgttatcaaagctc
atcacaaagcaggtgtggaagcagcctaaagtctggcaaggtttcgtcaaatgctgtcag
atgaccaaaccgcagtctttctcagttttacttcagcttccaccgcgacaacttgaaagt
gctttcgagatatgccctgaacttcgtgataatgttgtcaatcacgtccagtctttcact
ccacatcagcgtgcgcatattccacgttcagtccttcaaattctggacaaagaaaagaaa
actgaaacagatcaagctgataaggagcaagttgacccaaaacaagagactgaatcaaaa
accgaagaaatcccgtcttcaccaaagagatcccgatcgagctcgaaggaaaggcgcaag
gatcgtaaaagatctcgcagatctcgatccgggtctccacattccaaaagagagcacaca
gaagaagggagtgaaagtgaaggagagattgaagacactgaatcagataccctgcacgta
aaatag

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