Exaiptasia diaphana (Aiptasia): 110233268
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Entry
110233268 CDS
T05080
Name
(RefSeq) poly(A)-specific ribonuclease PARN
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110233268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epa03019
]
110233268
Enzymes [BR:
epa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
110233268
Messenger RNA biogenesis [BR:
epa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110233268
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
Motif
Other DBs
NCBI-GeneID:
110233268
NCBI-ProteinID:
XP_020894200
UniProt:
A0A913WU77
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All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MEVLRSNFLETLXIVSEAIESAAFVAIDAEFSGLNTKWRIENAIDSPQERYSKLKNTSKD
FIIIQFGLCTFSFDTQRNCYVAKPFNFYIFPRHLTRDSPDVRFLCQSSSIDFLVGHNFDF
NKWVREGISYLRPYDEDKLRMHFQERHEQSFGPFTSPGDTLNASSPAGSTTSTKSSSSKT
PVIIPPEHQPFVEKACNEIEEMLKDPEGKTTSLPPCNGYLRKLIYQSAKQKFTSGIQLEK
TTNEKRECYIVVTKVNEDEKKKLEEQKQSKEKQVIESAVGFSTVVKMLSQSGKLIVGHNM
LLDLMHLIHQFCCPLPDDVDEFKATVQALYPRIVDTKVMATTQPFRDQLPSTVLGDLVKH
LSVSPFKKPVVNLDEEFTRYNDGTESLHEAAYDAYITGLSFVSMANYLGCFQDPPKSRIS
PDSTLVSPFVNKIFLMRMEDIPYLNLAGEDLKPARDHVFHLTFPATWKYSDILDLFSPFG
FVYVSWVDDHSAFVSLAVRGNKNKVLNTLDVDGAGYSIVSYAEYFGYTEQESEYAEEYEG
GSKRQRSGXFSPLIEKKQRKRDASSSNDTSATNSEKKAEXSEPEEGEIFDEAEEPATKRK
KTDKNFEEPEDW
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggaggtattgcgttctaacttcttggagacactgcmtattgtatcmgaagctatygar
tctgcagcttttgtcgcgattgatgcagaattctcaggtttgaatacaaaatggaggatt
gaaaatgcaattgacagtccgcaagaacgctactcaaaactaaagaatacttccaaggat
ttcattattatacaatttggtttgtgcaccttttcttttgacactcaaaggaactgttat
gtagcaaaaccgttcaacttctacatctttccaagacacttaacccgtgacagtccagat
gtacgttttctttgccagagttccagcatagattttctcgtcggccataattttgatttt
aataaatgggtacgcgagggaatctcatatcttcgaccatatgatgaggataaacttagg
atgcattttcaagagcgacatgaacaaagttttggaccatttacktctccaggggacact
ttgaatgccagctctccagcaggatcaactacatcaacaaagagttcctcttcaaagact
cctgtgattatcccaccagagcatcagcctttcgttgagaaggcrtgcaatgaaatagaa
gagatgctkaaagatccwgaaggaaagaccactagtttaccaccatgtaatgggtacttg
agraaactgatataccagagtgcraagcaaaagtttacttcaggaatccaacttgagaaa
accactaacgagaaaagagaatgctacattgtggttaccaaagtcaatgaggatgaaaaa
aagaagttggaagaacaaaaacagtcmaaagaaaaacaagtaattgaaagtgctgttggt
ttttcaactgtggtcaagatgctttcccartctggcaagctcattgtyggccacaatatg
cttcttgatctaatgcacttgattcatcagttttgttgcccrctacctgatgatgttgat
gaattcaaagcaactgtccaggctttgtacccaagaatcgttgacacaaaagtcatggca
actacacaacccttcagagatcaactaccatctaccgttcttggtgatttagttaagcac
ctttctgtgtcaccattcaagaagccagtagtaaacctggatgaagagtttactaggtat
aatgatgggactgaaagtcttcatgaagctgcatatgatgcctacattactggcctgtcc
ttcgtctccatggccaactacttagggtgctttcaggatcccccaaaatcaagaatttct
cctgattcaaccttagtgtctccatttgtgaacaaaatctttcttatgagaatggaagat
attccatatctgaatcttgcaggtgaagatctgaaacctgccagagatcatgtgtttcat
ctaacattcccagccacctggaagtatagcgatatacttgacttgtttagtccttttgga
tttgtctatgtatcttgggttgatgatcattcagcctttgtctcccttgctgtgagagga
aacaagaataaagttttgaatactttggatgttgayggtgccgggtactcaattgtgtca
tatgcagagtactttggctacacagaacaagaatctgaatatgctgaggaatacgaagga
ggaagcaagagacaaagaagtggggrtttttctcctttgattgaaaagaaacagagaaag
cgcgatgcctcctcatcaaatgacacatcagcaactaattctgagaagaaggcagaaasc
agtgagccagaagaaggagaaatctttgatgaagctgaagaaccagctacaaaaagaaaa
aagacygacaaaaactttgaagaacctgaagattggtag
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