Exaiptasia diaphana (Aiptasia): 110233464
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Entry
110233464 CDS
T05080
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110233464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
epa03041
]
110233464
Enzymes [BR:
epa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110233464
Spliceosome [BR:
epa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
110233464
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
WHD_HA2
HA2_C
DEAD
AAA_22
AAA_19
PWI
nSTAND3
AAA_30
nSTAND_NTPase5
TsaE
Flavi_DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110233464
NCBI-ProteinID:
XP_020894416
UniProt:
A0A913WUQ3
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MANLTSWVADELHDVLGFSDKHTAEYLINLAKSSPSSETMLQKISDSLGGDAKMLSLARD
LWSKVPHKEQPTLHPYRAKEKALIEQQQKYSDYKLLSDDEDEEELIQSRKMQSKHERKRK
HLRRKEESSSSSDDEIADDSKNVHKDAESEEEWEKEENDRLKDLEERDAFAQRMKDKDKS
KQRNIMERSDKKAFEEAKKRLQLDEEDRKKMVPELRKQSRREYIKKRRVDKLEMLQEDIK
DDEYLFEESSLSKREKKEREYKKKVLSYAIQHQQAGEIEKVQRYHMPKEKQEPSQYDEII
DDEKGPNYEQKKWEEDKLGYAQMRFGAKDAKERNKSAEYDLLVEEEQIGFVMAEEIPGTK
MSKEPVKSEAEIKKQTIQEVRKSLPVYAYREELLQAVAEHQVLIIEGETGSGKTTQIPQY
LYEAGYTKDKKKIGCTQPRRVAAMSVAARVSEEMGTKLGNEVGYSIRFEDCCSERTILKY
MTDGMLLREFLGEPDLASYSVIIVDEAHERTLHTDVLFGLVKDIARFRPDIKLIISSATL
DADKFSSFFDDAPIFRIPGRRFPVHIYYTKAPEADYLDAAVVTVLQIHVTQPDGDVLVFL
SGQEEIETAQELLQERTRKLGSKIKELIILPIYSTLPSDLQAKIFEPTPPGARKVVLATN
IAETSLTIDGIIYVIDPGFCKQKSYNPRTGMESLVVTPVSKASANQRAGRAGRVAAGKCF
RLYTAWAYKNELEENTIPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPAETLILALEQ
LYALGALNHHGELTKLGRKMAEFPIDPMMSKTLIASEKYKVVEQMLTIIAMLSVNNAIFY
RPKDKIVHADNARMNFFRPGGDHITLLNVYDQWVETGYSTQWCYENFIQHRSMKRARDVR
EQLEGLVERVEIESTSNPHDYLAIRKAITAGYFYHTARLGKGGNYRTVKHQQTVMIHPNS
SLFQEQPRWIIYHELVFTTKEYMRQVIEIDNTWLLEVAPHYYKNKEVEDGSSHKMPKKXG
VTSEQLRST
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacttaacgagttgggtggctgatgaacttcacgatgttttaggattctctgat
aagcatacagcagagtatttgattaatctagccaagagttctccaagctcggaaactatg
ctgcaaaagatatcagatagtcttggaggggacgccaaaatgctcagtttggctcgtgat
ttgtggagcaaggttccacataaggaacagccaacactgcatccttacagagctaaagaa
aaggccctgattgagcaacaacagaaatacagtgattataaattattatcagatgacgag
gatgaagaagaacttattcagtcaagaaaaatgcagtcaaaacacgagcgaaagcgaaaa
catttgaggagaaaagaagagagtagtagctccagtgacgatgagattgctgatgactct
aagaatgttcataaagatgctgaatcagaggaagaatgggaaaaggaagagaatgatagg
ttaaaagatttggaggaaagggatgcatttgcacagagaatgaaggacaaagataagtca
aaacaaaggaatatcatggaaaggtcagacaaaaaggcatttgaagaagctaagaaaaga
ttacagcttgatgaagaagacagaaaaaagatggtaccagaactacgaaagcagtctcga
cgggaatacataaagaaaagacgtgttgataaactggaaatgctacaagaagacatcaaa
gatgatgagtatctttttgaggaatcctctctctccaaaagagaaaaaaaagaaagggaa
tacaagaagaaagttttatcatatgcaattcaacatcaacaagcaggtgaaattgaaaag
gtgcagcgttatcacatgccaaaagagaagcaggagccatcrcagtatgatgaaatcatt
gatgacgaaaaaggaccaaattatgagcagaaaaagtgggaagaggataaacttggttat
gcacaaatgaggtttggagctaaagatgctaaggaaaggaataagagtgctgagtatgat
cttctkgtggaagaggagcagattgggtttgtcatggcagaggaaataccaggaacaaag
atgtcaaaagaacctgtcaagtctgaagctgagatcaaaaagcagacaatacaagaggtt
cgtaaaagcttaccagtgtatgcatatagagaagagctcctacaagctgtggcagagcat
caagtgctgattatagaaggtgaaacagggtcaggaaaaacaactcaaattccacagtat
ctttatgaagcaggatatacaaaagacaaaaagaaaattggatgcacacagcctcgccgt
gtagctgctatgagtgttgctgcaagggtttcagaggaaatgggaacaaaactgggaaat
gaagtgggatayagyattcgatttgaagactgctgttcagaaagaactattcttaagtac
atgacggacggcatgttattgcgtgagtttcttggtgaacctgatttagcaagttatagt
gttataatagtagatgaagctcacgaaaggacccttcatactgacgttctgtttggctta
gtgaaggacattgcacgcttcagaccagatatcaaactcattatctctagtgcaactcta
gatgctgacaaattctcwagtttctttgatgatgcaccaatatttagaatacctggtcga
cgttttccagtacacatctactacactaaggcccctgaggcagattacctggatgctgcc
gtggtaactgtacttcaaatacatgtgacacagccagatggtgatgttctggtattcttg
tctggccaggaagagattgaaactgctcaggaattattgcaagagagaacacgaaaactt
ggttcaaagattaaagagttaattattctccctatctattctactctaccatcagatttg
caggcaaagattttcgaacccactccccctggtgctagaaaggttgtcctggcaacaaac
attgcagagacatcacttaccattgacggcatcatttatgttattgatcctgggttttgt
aaacaaaaaagttacaacccaagaactggcatggaatcacttgtagtcactcctgtttca
aaggcttctgcaaaccagagagcaggacgagcaggccgtgtagctgcagggaaatgtttc
cgtctttacacggcatgggcttacaagaatgaactagaggaaaacactatccctgaaatt
cagcggactaaccttggaaatgttgttctactgctaaagagtttgggaatcaatgatttg
atacactttgactttatggatcctcctcccgctgagacattaatccttgcattggagcag
ctttatgcattgggtgcgctaaatcaccatggtgaactgacaaagcttggaaggaagatg
gcagagtttcctattgatcccatgatgtccaagactttgattgcttctgaaaagtacaag
gtkgtagaacagatgttgaccattattgcaatgctatctgtaaacaatgccattttctat
cgaccaaaagacaagattgtacatgctgacaatgcacgcatgaacttcttccgtcctggt
ggagaccacataacattgttaaatgtctacgaccaatgggtagaracaggctactccact
cagtggtgctatgaaaactttattcaacaccggtcaatgaagagagcaagagatgtcaga
gaacagttagaaggacttgtggagagagttgaaatwgagtccacatctaatcctcatgat
tacttagccatacgtaaggcaattacagcaggatacttctaccatacagcaaggcttgga
aaaggtggaaactacaggacagtgaaacatcaacagacagtaatgattcatcctaatagc
agtttgtttcaagagcaaccaagatggattatttatcatgaattagtcttcacaaccaaa
gaatatatgagacaggtaatagagatagataatacgtggctcctggaagttgctcctcat
tactataaaaacaaagaagtggaggatggttcttcacacaaaatgcctaaaaaarttgga
gtgacaagtgagcaactacgctctacatga
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