Exaiptasia diaphana (Aiptasia): 110233503
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Entry
110233503 CDS
T05080
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110233503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
epa03041
]
110233503
Spliceosome [BR:
epa03041
]
Complex B
Other components
Prp19-related factors
110233503
Complex C
110233503
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
Nup35_RRM_2
zf-CCCH_2
zf-CCCH
zf-CCCH_4
RRM_occluded
RRM_YTH1
zf-CCCH_PARP12
zf-CCCH_DUS3L
RRM_PARP14_3
RRM_3
Motif
Other DBs
NCBI-GeneID:
110233503
NCBI-ProteinID:
XP_020894452
UniProt:
A0A913WUU8
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MATSKSANTYNRQNWEDAEFPILCQTCLGDNPYIRMTRETHGRECKICARPFTIFRWCPG
AKMRFKKTEICQTCSKLKNVCQTCLLDLEYGLPVQVRDKSLGLKDDIPKSDVNKEYYTQN
IERQLGDSDGTTPGGALGKANAPSDLLMKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHDMPTDPNDPLADQNIKDRYYGVNDPVANKLLNQASSMPSLDTPSDRSITTLYVGGLE
GKVTEQDLRDYFYQFGELRSITMVPRQNCAFVCFASRNSAETAAEHSFNKLILKGRRLKI
MWGKAQGQQPTPGHKGGANLTPVPGLPGALPPPPGNDKDQEANFFNLEXNHTIPPPPTSG
ARPPPPQPPPNLPPPPGQRHRMPPPPPMRMPGGMHPPPPGFLPPPPFGPPPPFGPPPPFY
QGPPPPRGGPPPRPRPPPVHYPSQDPQRLGTSKGSQQQEPDKTKTSST
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcgaagagtgcaaatacttataacagacaaaactgggaagatgccgaattt
ccaatattatgtcaaacctgtcttggtgacaatccttacattcgtatgacaagagaaact
catggtagagaatgcaaaatatgtgccagacctttyaccatattccgctggtgtccagga
gccaaaatgagattcaaaaaaacagaaatttgtcagacatgctcaaagctaaagaatgtt
tgtcaaacttgtcttcttgatttagagtatggtcttccagtacaagttagagataagtcc
ttaggtcttaaagatgatataccaaagtcagatgtcaataaggagtactatacacagaac
atagaaagacagcttggggattcagatggaactactcctggaggtgctctgggcaaagcc
aatgcaccaagtgatcttttaatgaaacttgcaagaacaacaccatattacaagagaaat
agacctcatatctgttcattttgggttaaaggggagtgtaaaagaggagaagaatgccct
tacagacacgatatgcccaccgaccccaatgayccacttgctgaccaaaacatcaaagac
cgttactatggygtcaatgatcctgttgccaacaagcttctcaaccaggcctccagtatg
ccgtcactagatactccctctgataggtcaataactacactttatgttggtggtttagag
gggaaagtcacagaacaagatttaagagattacttttaccagtttggtgaattaaggtca
ataacaatggtaccaagacaaaactgtgcatttgtgtgcttcgcgtctcgtaattcagct
gaaactgctgcagaacactccttcaacaagctgattctcaaaggtcgaaggttaaagatt
atgtggggtaaagcacaagggcaacagccaactcctggacataaaggtggtgccaatctg
acacctgttcctggactacctggtgctctcccacctccaccaggaaatgacaaagaccag
gaagcaaacttctttaatctagaawcaaatcataccatcccgccaccacctacatcagga
gctcgaccgccaccrccacaaccaccaccaaacctccctcctcctccaggacaacgacac
agaatgccwccacctcctcccatgagaatgccaggtggtatgcatcctcctccccctggt
ttcctcccaccacctccatttgggcccccgcctccatttggacccccaccacccttctat
carggacctccaccacctagaggggggcctccacctcgaccaaggccgccacctgttcay
tatccatcgcaggacccccaaagacttggtacttctaaaggatctcaacagcaagagcca
gataagaccaaaacctccagtacttga
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