KEGG   Exaiptasia diaphana (Aiptasia): 110233583
Entry
110233583         CDS       T05080                                 
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
epa  Exaiptasia diaphana (Aiptasia)
Pathway
epa03040  Spliceosome
epa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:epa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110233583
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110233583
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:epa03041]
    110233583
   04121 Ubiquitin system [BR:epa04121]
    110233583
   03400 DNA repair and recombination proteins [BR:epa03400]
    110233583
Enzymes [BR:epa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110233583
Spliceosome [BR:epa03041]
 Complex B
  Other components
   Prp19 complex
    110233583
 Complex C
   Prp19-CDC5 complex
    110233583
Ubiquitin system [BR:epa04121]
 Ubiquitin ligases (E3)
  U-box type E3
   110233583
DNA repair and recombination proteins [BR:epa03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    110233583
SSDB
Motif
Pfam: WD40_Prp19 WD40 Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_SCAP U-box Beta-prop_Vps41 Beta-prop_EIPR1 PEP5_VPS11_N Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_WDR75_2nd zf-Nse Beta-prop_DCAF12 B-prop_COPA_B_2nd PAS_11 PUMA_CC
Other DBs
NCBI-GeneID: 110233583
NCBI-ProteinID: XP_020894539
UniProt: A0A913WV18
LinkDB
Position
Unknown
AA seq 508 aa
MAMYCSISNEIPEHPCVSPASGHVFERRLIEKYIAENGTDPITGDVLSEEQLIEVKASPL
VKPRPPSATSIPAILKGLQDEWDACMLHSFTLRQQLQTARQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGIAAVPAASAAAPASIPMEENMEVSVPAGETGMSEEVLQKLQ
KKATLLTAERKKRGKRMPEDLTAPEKLRNYHQVATYPGLHSASTPGILALDVQLTDTSKV
LTGGLDKNAIVFYKDTEQVVATLKGHTKKVTNVIYHPTEEIGITGSADSNIKVWSLLNGT
CTHTIKAHDEGVTGLSLHATGDYLLSCSADQHWAFSDIRTGHVLNKCLSDPSVNQGLTCA
QFHPDGLIFGTGTSDSLIKIWDLKERANVAKFPGHSGPITDITFSENGYYLATSADDAVV
KLWDLRKLKNFKTITLHDTFEVKSLSFDQSGTYLAVGGSEIQIYVVKQWELLNSFNDHTG
LVTGVKFGQHAGSLISSSMDRHLKFFSL
NT seq 1527 nt   +upstreamnt  +downstreamnt
atggcgatgtactgttcaataagcaatgaaattccagagcacccctgtgtgtctccagca
tcaggtcatgtctttgagaggagacttattgaaaagtatatagctgaaaatggtacagat
cccatcactggtgatgtgttgtctgaagaacaattgattgaagtaaaagcaagtcctttg
gttaagccaagaccaccttctgcaacaagtattcctgctatattaaagggacttcaggat
gaatgggatgcatgtatgttacattctttcactctcagacagcaactacaaaccgcaaga
caagaactttcccatgccttgtatcaacatgatgcagcttgtcgtgtcattgcaaggyta
actaaagaagtgacagctgcacgtgaagctttggcgactcttaaacctcaagctggtatt
gctgcagttcctgctgcatcagctgctgcgccagcatctatacctatggaagaaaacatg
gaagtttctgtgcctgctggagaaactggtatgagtgaagaggtcctccagaaattgcaa
aagaaagctacccttcttacagcagaacgtaaaaagagaggcaagagaatgccagaagat
cttacagcaccagaaaaacttagaaattatcaccaagtggcaacatacccaggtcttcac
agtgcaagtactccagggattttggctctcgatgttcaacttacagatacttctaaagtt
cttacaggtggactggacaagaatgctattgttttctacaaagacactgaacaggttgtt
gcaacacttaaagggcataccaagaaagtcacaaatgttatttatcaccctacagaggag
attggtatcacagggtctgctgatagcaatataaaggtgtggtcactattaaatggtacc
tgtactcataccatcaaggcacatgatgaaggagtcactggacttagtcttcatgcaaca
ggcgactatttgttgagttgttctgcagatcagcactgggcattctctgatattcgtact
ggtcatgtgttgaataaatgtctgtctgatccatctgttaatcaaggtctgacttgtgca
cagttccatcctgatggtctcatctttggtactggtacatctgatagcttaattaaaatt
tgggatttgaaagaaagagccaatgttgctaaattccctggccactctggacctataact
gatatcaccttctcagaaaatggttactatttagctacwtcagctgaygatgctgttgtt
aaactttgggatttgaggaagctgaaaaactttaagactatcacattgcatgatactttt
gaggtcaaatctctcagttttgatcagagtggtacatacctggctgtaggaggatcagaa
attcaaatttatgtggttaaacagtgggaacttttgaacagctttaatgatcacacagga
cttgtgacaggagtgaagtttggtcaacatgctgggtctctcatctcctcaagcatggat
cgacacctcaaattcttttctctataa

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