KEGG   Exaiptasia diaphana (Aiptasia): 110233620
Entry
110233620         CDS       T05080                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
epa  Exaiptasia diaphana (Aiptasia)
Pathway
epa03030  DNA replication
epa03410  Base excision repair
epa03420  Nucleotide excision repair
epa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:epa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110233620
   03410 Base excision repair
    110233620
   03420 Nucleotide excision repair
    110233620
   03430 Mismatch repair
    110233620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:epa03032]
    110233620
   03036 Chromosome and associated proteins [BR:epa03036]
    110233620
   03400 DNA repair and recombination proteins [BR:epa03400]
    110233620
DNA replication proteins [BR:epa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    110233620
  DNA Replication Termination Factors
   ELG1-RFC complex
    110233620
Chromosome and associated proteins [BR:epa03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    110233620
DNA repair and recombination proteins [BR:epa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     110233620
  Check point factors
   HRAD17(Rad24)-RFC complex
    110233620
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 Viral_helicase1 RCF1-5-like_lid AAA_14 AAA_16 AAA_24 Rad17 nSTAND3 Mg_chelatase DEAD AAA_23 RuvB_N AAA_11 AAA_30 MipZ FtsK_SpoIIIE AAA_18 AAA_19 ABC_tran AAA_assoc_2 AAA_5 RNA_helicase AAA_25 NTPase_1 MeaB Gp44_lid AAA_28 SLFN-g3_helicase AAA_29
Other DBs
NCBI-GeneID: 110233620
NCBI-ProteinID: XP_020894587
UniProt: A0A913WV68
LinkDB
Position
Unknown
AA seq 392 aa
MMLNTHEKLGPRKFWREKLTRDIDKMADVEQMETDIVDEKXMKSTSQTAKMDVDLPEAET
KKSSGDKPGKKLSKGFELPWVERYRPTKLSEIVGNEETVSRLQVFSEQGNVPNIIIAGPP
GSGKTTSILCLARALLGSSFKDAVMELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKII
ILDEADSMTDGAQQALRRTMEIYSKTTRFALACNTSEKIIEAIQSRCAILRYSKLTDSQV
LTRLLEICDKEKVPKTDDGLEAIIFTAQGDMRQAINNLQSTYYGFGMINSDSVFKVCDEP
HPLLIKEMLKSCSKGDIDSAYKTLSHLWQMGYSPQDIISIIFRVCKTMELAEYLKLEFIK
EIGFTHMRIVEGVDSLLQLSGLLARLCKKVAT
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgatgctgaacacgcacgagaaactgggacctagaaaattttggcgggaaaagctcaca
cgtgacattgacaaaatggcggacgttgaacagatggaaacagacatagtcgatgaaaaa
awkatgaaatcaacctcacagacagcgaaaatggacgtggatttgccggaggcagagacc
aaaaagtcttctggtgataaaccaggaaagaaattgtccaaagggtttgaattgccatgg
gttgagagatatcgtccaacaaagctcagtgaaattgttggtaatgaggaaactgtctca
agacttcaggtattttctgaacagggaaatgtacctaacatcattattgctggcccacct
ggttcaggtaaaactactagtattctgtgtttagcaagagcactgctcggaagctcattc
aaagatgctgtcatggaactcaatgcctcaaacgacagaggtatagatgtagttcgaaat
aaaatcaagatgtttgctcaacaaaaggtgactttaccaaaaggacgacacaagataata
attcttgatgaggctgacagtatgactgatggtgctcaacargcattgagaagaaccatg
gaaatatactctaaaacaacaaggtttgccttggcttgcaacacatcagaaaagattata
gaggcaattcaatcaagatgtgctattttgaggtattcaaagctaacagacagtcaggtt
ctgacaagattattagagatatgtgacaaagaaaaggtaccaaaaacagatgatggatta
gaggcaattatatttacagcacaaggggacatgcgtcaagcaatcaataaccttcaatca
acatattatggctttggtatgataaacagtgacagtgtattcaaggtttgcgatgagcca
catcctttactgatcaaagaaatgttaaagtcatgttcaaagggagatatcgacagcgcc
tacaaaaccctttcacatttatggcaaatgggttactcacctcaggacatcatatccatc
atctttcgtgtctgtaaaactatggaattggcagagtatttaaaactagaattcatcaag
gaaattggtttcactcacatgagaattgttgaaggcgttgattctcttttacaactatca
ggtcttctggctcgtttatgtaaaaaagtagctacataa

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