Exaiptasia diaphana (Aiptasia): 110233967
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Entry
110233967 CDS
T05080
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03018
RNA degradation
epa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110233967
09123 Folding, sorting and degradation
03018 RNA degradation
110233967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epa03019
]
110233967
03041 Spliceosome [BR:
epa03041
]
110233967
Messenger RNA biogenesis [BR:
epa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110233967
mRNA degradation factors
5'-3' decay
Lsm complex
110233967
Spliceosome [BR:
epa03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
110233967
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
RVT_2
Motif
Other DBs
NCBI-GeneID:
110233967
NCBI-ProteinID:
XP_020894998
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MATSLESYVNHTVAVITQDGRMIVGTLKGFDQTVNIILDESHERVFSSGSGVEQVLLGLY
IIRGDNIAVIGEIDEEVDASMDLSDIRADPLNSVVY
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctccttggaatcgtatgtaaaccatactgtagctgtcataacgcaggatgga
cgaatgattgtgggtacccttaaaggctttgaccaaacagttaatattatactcgacgag
agccatgaaagagtcttctcatctggaagtggagtggagcaagttttacttggtctttat
ataatacgtggagataacattgctgttataggtgagattgacgaagaagtggatgcatct
atggatctatcagayataagagcagaccccctgaactctgttgtgtattaa
DBGET
integrated database retrieval system
