Exaiptasia diaphana (Aiptasia): 110234535
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Entry
110234535 CDS
T05080
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110234535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epa03019
]
110234535
Messenger RNA biogenesis [BR:
epa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110234535
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
110234535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
110234535
NCBI-ProteinID:
XP_020895575
UniProt:
A0A913WXH2
LinkDB
All DBs
Position
Unknown
AA seq
191 aa
AA seq
DB search
MALDGDVTIVVPGERLGSLEQFAAGNGTYSRHGYVYSSLAGLKHVVQGQEKQTISVMREE
QESVVPGVGSVVTCKVTSVNPRFCKVSILGVDSTALKEPFRGIIRKEDVRATEKDRVEIY
KCFRPGDIVVAKVMSLGDALSYQLSTADNSLGVVFAKSEAGATMVPISWCEMQCPKTMAK
ESRKVAKVQSQ
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atggcactagacggcgatgtaactatagtagttcctggagagcgtctaggtagtttagag
cagtttgcagcaggaaatggcacatattccagacacggttatgtatactcaagcttggca
ggactcaaacacgtggtgcaaggacaagagaaacaaactataagtgtcatgagagaggaa
caagaaagtgttgttccaggagtgggatctgttgttacatgtaaagtaactagtgtcaac
cccaggttctgtaaagtatcaatacttggagtggattctacagctctcaaagaaccattc
agaggaatcattagaaaagaagatgtccgtgctacggagaaggacagagttgagatttat
aagtgttttcgacccggtgacattgtagtagctaaagtaatgtcacttggggatgctctt
tcataccaactgtctacagctgataacagtttgggtgttgtctttgctaagagtgaggct
ggagctacaatggttccaataagttggtgtgaaatgcagtgcccaaagacaatggccaaa
gagtcaagaaaagttgctaaagtgcaatctcaatga
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