Exaiptasia diaphana (Aiptasia): 110234744
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Entry
110234744 CDS
T05080
Name
(RefSeq) collagen alpha-2(I) chain
KO
K06236
collagen type I alpha
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa04512
ECM-receptor interaction
epa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110234744
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110234744
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
epa00536
]
110234744
Glycosaminoglycan binding proteins [BR:
epa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110234744
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWA
WAP
Motif
Other DBs
NCBI-GeneID:
110234744
NCBI-ProteinID:
XP_020895789
UniProt:
A0A913WXS5
LinkDB
All DBs
Position
Unknown
AA seq
2018 aa
AA seq
DB search
MQYSDSASVLINLDRTYNRDALEGVISREMGLYGSGLNLAELFNKAADHGFTIYGGTRQT
APKVLVVFIPGPVSSSPEEIRRAADKLKGLGVRLVILGLNNAIDKALYSTIVTQPASKYL
LTADTYNGLSLALSAAQNRICNAKYGRCPKTPEPPAECPDDAEDECSQDRDCKTPGDLCC
KGGCSRTCQKGVENCFVPMDIAFALDVSETTTSDQLKEMKEFVRETMRSFASAENDIHFS
LMQYAGSPQQLTQGFRRFPSEGDLLNVLNNVKATGDPRRRVDLALASAKRNIFSLEGRMR
HGHPRYLIFVTSAVTSADSTDLPQARSPLDSINVKTIAIGANKDVQTDFLKQLASENSLV
FQADSPDQLSNIRQQITSRFCDKKPGKCVPPSVPPDPAVCASQPKVPLQFIPCGDSLKGK
EGRSQRENDWDCPGESKCCKDPDTGCHNVCRYPPIVCNKVKDLELVVEASQFIGEGAFAR
IKQFLQYFVEAFGVSRDGTHVGMITYGSRNREAFRLNAYRDVKGVKDGIKNARFMGGFPY
PSEALVTALDVSFTRRGGARPENVNKSLVLFTTGKFEKPEKAAAVAFQLKEKLIDVYAVA
IGDNPEIDNLRNVVSRPLEDNIFMVSSPEALRAQARALVKRVCDGAEKNYVVIGPNGPPG
DPGLQGRLGPPGRRGYIGEPGPAGDKGPKGGDGPPGNPGNPGPQGPPGPMKVKTIPGPKG
PVVVPQITYGGAGALQTMGDPGPPGRLGSRGHDGRPGIPGPRGAPGERGPMGVIGLIGPP
GPPGRPGEDGDPGSRGRQGPRGDPGRKGPPGHRGKSGLAGRDGHRGRNGRRGKKGDRGGD
GDRGLVGVVGLNGIDGIDGERGQRGQPGMIGDAGPSGLSGPRGSSGRAGSQGSAGINGPA
GPPGPRGPKGVPGRSGNKGPMGYSGETGITGVPGLKGVAGKNGEAGEQGNAGPKGANGDI
GGAGEQGPIGETGARGMSGNSGGRGARGDVGDAGKVGADGEVGTKGGPGKPGDSGGQGQP
GPVGKRGAPGQAGLAGRPGPPGKRGMVGSQGFQGKQGSRGTKGSGGETGARGGSGNKGDA
GETGGSGATGPNGERGARGRAGNPGKDGGRGLPGDGGDDGRAGEKGPPGARGPTGPRGLM
GPKGKTGKQGKIGVTGKVGPSGVKGEQGVVGARGLPGVAGEMGGAGSVGGAGPVGEPGGQ
GGAGKLGSRGLAGKPGSDGPKGNTGLSGNDGRNGKDGPVGERGTIGAVGDPGKTGESGST
GRPGVRGVSGASGATGADGRAGPTGSPGLPGDSGKNGGKGGRGDEGNTGARGEGGPDGGK
GPDGGDGERGPLGTKGMPGERGDDGAAGDPGNAGDSGARGDQGGVGKTGQMGLQGTTGAA
GPQGVIGGQGQKGVRGERGETGFVGSAGLQGSTGSKGPKGGIGNQGPSGEVGGPGGLGLP
GPTGPSGPGGIAGKPGPSGTPGQKGPPGDAGSAGDLGEEGEPGKDGKDGIDGGSGEIGSA
GTIGPGGLPGESGPGGPRGGVGLPGNAGADGIGGLKGESGASGKDGKAGPGGPSGIVGEE
GKVGSTGIAGSDGAPGTAGSLGAQGKTGRKGVLGDQGKQGLQGAQGQKGPAGAVGQRGST
GLEGLQGVIGAAGAKGTAGEAGKQGSQGEGGGKGDTGSVGQKGDRGEAGRRGRIGAPGPK
GMFGALGPPGPLGLPGDRGSLGEPGAFGPPGRVGPPGPSGDNGIRGGKGDRGNMGSDGKQ
GQPGPPGPPGPPGTISGTWTSEAMQSYELGAQKTPYRLYNSRQAAREKIESGGSNTDLFG
DIVTLSYEIQSFKRPTGSKNFPAKTCKDLHMCHPNLRSGNYWIDPNEGIPDDAINVYCDF
ETQATCIYPLNNTKVFQSPRRKWYSGPDQYKWFGKELQGLATMKYSFEPSQLVFLRILSD
RARQNITYHCRNSVAWSNKHSIKIVGDNGIEFHASSSNKFRPIIIKDDCHIKDGKWRQTV
ISVDTSKPYRLPIRDIAMYDIGDREEEFGVDIGPVCFS
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atgcagtattcagactctgccagtgtactgataaacttggatcgtacttacaatcgagat
gctttggagggtgtcatcagcagggagatgggattgtacggctcgggactgaacttggcc
gagttattcaacaaagccgctgatcatggttttaccatatatggtggtacacgtcagact
gctcctaaagttctcgtcgttttcattcccggcccagtctctagcagtcctgaagagatc
agaagagctgcggacaaactgaagggactgggagtgagactcgtaatccttggtttgaat
aatgcaattgataaggcactctacagtaccatagttacccagcctgcctcaaaatacctg
cttaccgctgacacatataacgggttgagtcttgccttgagtgcagctcaaaacagaatc
tgtaacgctaaatatggtaggtgccccaaaacccccgaaccacccgctgagtgtccagat
gacgctgaagacgaatgttcacaggatcgagactgtaagacaccaggggatctttgctgc
aaaggaggatgctcaagaacctgccaaaagggcgttgaaaattgttttgtcccaatggac
atcgcctttgctctcgatgtgtctgagacgacaacaagtgaccagctgaaggaaatgaag
gagtttgtcagagagactatgagatcatttgcttctgcagaaaatgacattcacttcagt
cttatgcaatatgcaggaagcccacaacagctaactcaaggctttagacgcttcccttcg
gaaggagatttgctcaatgttctgaataatgtcaaggcaacgggagatccaagaagacga
gtagatctggccctagcctctgcaaagcgtaacatcttcagtctggaaggacgcatgcgt
catggacatcctagatatttaatcttcgttacttctgctgttacgtcagcagactcaact
gatctgcctcaagctaggagtcctcttgattcaataaacgtgaaaactattgctatcggc
gccaacaaagatgttcaaacagatttcctgaagcagttggcatcagagaatagtttggtc
ttccaagcggattctcctgatcagctttccaatatacggcaacaaataacatcccgattc
tgtgataagaaaccaggaaaatgtgttccaccttcagtacctccagatcctgcagtatgt
gcgtcacaacctaaagtcccccttcagttcataccatgcggagattcacttaaaggaaag
gaaggacgatcacaacgagagaacgactgggattgcccaggggaatctaagtgctgtaag
gaccctgatacgggatgtcacaatgtctgccgctacccaccaattgtttgcaacaaagtc
aaagatcttgagcttgtggtagaagcatctcaattcatcggtgaaggtgcttttgcaagg
ataaaacagttcctgcagtatttcgttgaggcgtttggagttagtcgcgatggcacccat
gttggaatgataacgtatggttcacgtaatcgcgaggcgttcagactgaatgcgtacaga
gatgttaagggtgtaaaggacggcatcaagaatgctcggttcatgggtggattcccttat
ccatcagaagctttggtaactgctcttgacgtgtcgttcactagacgtggtggcgcacga
ccggaaaatgtcaacaagtccttagtgctcttcactactggtaaattcgaaaagcctgaa
aaagctgctgcagtagccttccaactgaaagagaagcttattgatgtttacgctgttgcc
attggtgacaatccagaaatagacaaccttagaaatgtagtctccaggcctcttgaagat
aatatctttatggtgtcatcacctgaagctcttcgagcccaggctcgcgcgttggtcaaa
agagtttgcgatggagctgagaagaattacgtggtcattggaccaaacggaccccccgga
gatccaggacttcagggaagacttggaccacccggacgacgtgggtacattggtgaacca
ggaccggcgggagacaaaggacctaagggaggcgatggacccccaggaaatccaggaaat
cctggtccacaaggacctcctggaccaatgaaagtcaagacaattcctggacctaaagga
cctgttgtcgtacctcaaatcacttatggcggcgctggtgctctacaaacaatgggcgac
ccaggaccacctggccgactaggaagtagaggacacgatggacgtcctggaatacccgga
ccacgtggtgcacctggagaaagaggaccaatgggagtgattggactcattggacccccc
ggacctcctggacgtcctggcgaagatggagaccctggttctcgaggacgtcagggacca
cgtggagatcctggtcgaaagggacctcctggtcaccgaggcaaatctggacttgctgga
cgagatggacatcgtggtcgtaacggacgtagaggcaaaaagggagatcgtggtggcgat
ggtgatcggggattagttggtgtggttggactcaacggaatcgatggtattgatggtgag
cgaggacagcgcggccaaccaggaatgatcggtgacgctggaccatctggtctatctgga
ccacgtggttcatcaggtcgtgctggatcacagggcagcgccggtataaatggccctgct
ggtcccccaggaccgcgaggacccaagggtgtacctgggcgctcaggcaacaagggaccc
atgggttactcaggggaaactggtataactggtgtccctggtctcaagggagtggccggt
aaaaacggcgaagctggagaacaaggcaatgcaggacctaaaggcgccaatggtgacatt
ggaggagctggcgaacaaggtcctattggagagactggagctagaggaatgtctggtaac
tcaggtggtcgaggtgcacgtggggatgtgggagacgcaggaaaggtcggtgcagacgga
gaggttggcactaaaggcggaccgggtaaacctggtgatagtggcggtcaaggacagcca
ggacccgtagggaaaagaggagctccaggtcaagctggacttgcaggtcggccagggccc
cctggaaaaaggggcatggtcggctcgcaagggttccagggaaaacaaggtagcagaggc
actaagggatctggtggtgaaactggagctcgcggaggatctggaaacaaaggagatgct
ggcgaaaccggaggttctggggccacaggacccaatggcgaacggggtgcacgtggccga
gctggcaatcctggaaaagatggcggcagaggacttcctggagatggtggcgacgatgga
agagctggtgagaaaggccctccaggtgctcgtggaccaacaggaccaagaggtcttatg
ggacctaaaggaaagacgggtaaacaaggcaaaatcggtgtaacaggaaaagttggacca
tcaggagtgaagggagaacaaggtgttgtaggagcgagaggtttacctggtgtagctggc
gaaatgggtggagctggctcagtaggtggggcaggtcctgttggcgagccaggtggtcag
ggtggcgcaggaaagctcggatcacgtggccttgctggtaaacccggaagtgacggtcct
aaaggaaacactgggttatccggcaatgatggacgaaatggaaaggacggccctgttggc
gaaagaggaacaattggtgcagtgggtgacccaggcaaaactggtgaatctggcagcact
ggacgcccaggagtcagaggcgtatctggagcctcgggcgctactggtgccgatggtcgt
gctggaccaacgggttctcctggtctaccaggcgactctggcaaaaatggtgggaaaggc
ggaagaggagacgaaggaaatacaggagcacgtggtgaaggaggaccagatggcgggaag
ggtcctgacggaggcgacggtgaacgagggcctctaggtactaaaggaatgccgggtgag
cgtggtgacgatggtgctgcaggtgatccaggaaatgctggtgattcgggagcacgcgga
gaccaaggaggtgtaggcaagactggccaaatgggtcttcagggcactacaggtgctgca
ggaccacagggtgtcattggcggacagggacaaaagggggttcgaggagaacgtggcgaa
accggttttgttgggtcagcgggtctgcagggatctactggatccaaaggtcctaaagga
ggaatcggcaaccagggtccatctggcgaagtgggtggtcctggaggtcttggattacct
ggtccaactggtccatcgggacctggaggtatcgctggtaaaccaggtcctagcggtaca
cctggacaaaagggcccccctggtgatgcaggatcagctggagatcttggtgaagaagga
gaaccgggtaaagacggaaaggacggcatagatggcggttcaggagagattggttcagcg
ggaacaataggacctggtggacttcctggcgaatctggacccggtggaccacggggtggt
gttggccttcctggaaatgctggtgccgatggtattggaggactcaagggtgaatctgga
gcttctggcaaagacggcaaagctggacccggcggaccatccggaattgttggtgaagag
ggtaaagttggaagtacgggtatagctggttccgatggagctcctggaaccgcaggaagc
ctgggtgctcaaggaaaaaccggtcgaaagggtgtgcttggtgaccaaggtaaacaaggc
ctgcagggtgcacaagggcaaaagggaccagctggagcagtaggacagcgaggatcaact
ggattagaaggtttacagggtgtcataggagcagctggagctaaaggaaccgctggtgaa
gctggcaaacagggttctcaaggtgaaggcggtggcaagggagacactgggagtgttgga
cagaagggagaccgcggagaggcaggtagacgaggccgtattggtgcaccaggacccaag
ggtatgtttggtgcactaggaccaccaggaccacttggacttcctggcgacaggggatca
ttaggagagccaggagcgtttggtcctccgggaagagttgggccgcctggaccatctggt
gataatggtatcagaggaggcaagggagaccgtggaaacatgggatcagatggaaaacag
ggacaaccagggcctcccggacctcctggacccccgggtaccatttcaggaacgtggacg
tccgaagccatgcaaagttacgaacttggagcacaaaagacaccttacagactctataac
agccgtcaagcagcaagagaaaagatcgagtctggtggaagtaacaccgatcttttcggt
gacattgtgactctaagttacgagatccagagcttcaagcgaccaacaggctccaagaac
ttccctgccaaaacatgcaaagacttacatatgtgccatccgaatctccgtagtggaaac
tactggattgaccctaatgagggcatcccagacgacgccattaacgtgtattgtgacttt
gaaacccaagctacctgcatttatccattaaataacaccaaggtgttccagagcccaaga
cgcaaatggtattctggtccagatcaatacaaatggtttggtaaagaactacaagggctt
gcaacgatgaaatactcatttgagccaagtcagttggtgtttctacgtattctgagtgac
agagcccgtcaaaatattacataccattgtcgcaattcagtagcatggtccaacaagcat
tctatcaagatcgtgggagacaatggcattgagttccatgcaagcagttctaataaattt
agacccattattataaaagacgactgtcatatcaaagacggaaaatggcgacaaactgtc
atttctgtcgatacatccaaaccctatcgattaccaattagggacattgcaatgtacgac
atcggcgatcgagaggaagagtttggtgtggacattggtccagtctgcttctcctag
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integrated database retrieval system