Exaiptasia diaphana (Aiptasia): 110235035
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Entry
110235035 CDS
T05080
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110235035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epa03019
]
110235035
Enzymes [BR:
epa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
110235035
Messenger RNA biogenesis [BR:
epa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110235035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
110235035
NCBI-ProteinID:
XP_020896112
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MCEILRSNFEECFHEIEDVIKKSSFVAIDAEFTGLSLNDSSVYSLFDNASTRYKKLKKSV
SQFVISQFGLCAFVENTEELNRYTAYTYNFYLFQPSFGPVDCRFLCQTSSLEFLCQNKFN
FNKFIHEGVPYLNKEEEKEIKTQHENHTLHCNMTSYKLGDLDEEIKAEIAKTDLWLQSAK
EGDEMTFNSENYIKQYMLLIELKNQFKHRNINCKVQDGFRIVITKKCSSDENIESKFQKE
VGRIFLSIVGFSRVIQLLVKTKKPIVGHNLLTDLMLVYDKFICPLPDQYDEFKRALHEAF
PVVCDTKQLAFKLRRLEILHNCTFLDSTNLDQLYTALTSDVARFFVLYNPSIELAEISKR
YAEKSHLHEAGYDAYLSGYVFLRLAHLYSAKSKGTQLSRAIPFPKYLKMLHPYINIINIA
RASIPYLNLAGDDPPSVRPQWFCVKSRGSSPLSGPECTRYPV
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaaattctacgcagtaacttcgaagagtgtttccatgagatagaggatgtaatc
aagaaaagctccttcgtagctatagatgcagaatttacaggactgtccctaaatgacagc
tcagtttacagcctttttgacaatgcttcaacaagatacaaaaagctcaagaagtctgtc
tctcaatttgttatttcccagtttggtctttgtgcctttgtagagaatactgaagaacta
aacaggtatacagcatatacctataacttttacctgttccaaccctcctttggtcctgtt
gattgcagatttctatgtcagacatcaagcctggaatttctgtgtcaaaacaagtttaat
ttcaacaagttcattcatgaaggtgttccatacctgaataaagaagaggagaaagaaatc
aaaacacagcatgaaaaccatactcttcattgtaacatgacatcttacaaacttggagat
cttgatgaagaaatcaaggctgaaattgcaaagacagacttatggttacaatcagcaaag
gaaggggatgaaatgacattcaattcagaaaattatatcaaacaatatatgcttctcatt
gaattaaagaatcaattcaagcacagaaacattaactgtaaagtacaggatggattcagg
attgttattacaaaaaaatgttcatcagacgaaaatattgagtctaaatttcaaaaagag
gttggaagaatattcttgagtatagtgggattttcaagagtaattcaacttttggtcaag
actaaaaagcctattgtaggtcataacttgttaacagacctgatgcttgtttatgataaa
ttcatttgtccattaccagatcaatatgatgaattcaagagagctcttcatgaggctttc
cctgtcgtttgtgacactaaacagctagctttcaaactacgccgacttgagattttacac
aactgtacttttcttgatagcaccaatcttgaccaattgtacactgcacttaccagtgat
gtggcaagattttttgtgctgtataacccaagcattgaattagcagaaatttccaaaaga
tatgctgaaaaaagccatctacatgaagctggctatgatgcctatctatctggatatgtt
tttttaagactcgcacatctgtactcagccaaatcaaaaggcacacaactttcaagagct
attccattccccaagtatcttaaaatgttacacccatacatcaatatcataaatatagca
agagcaagtattccatatttgaatttagcaggggatgaccctccctctgtccgcccacaa
tggttttgtgtcaagtcacgtggttcatcaccactttctggacctgagtgtacaagatac
cctgtgtag
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