Exaiptasia diaphana (Aiptasia): 110237851
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Entry
110237851 CDS
T05080
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03018
RNA degradation
epa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110237851
09123 Folding, sorting and degradation
03018 RNA degradation
110237851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epa03019
]
110237851
03041 Spliceosome [BR:
epa03041
]
110237851
Messenger RNA biogenesis [BR:
epa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110237851
mRNA degradation factors
5'-3' decay
Lsm complex
110237851
Spliceosome [BR:
epa03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
110237851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
110237851
NCBI-ProteinID:
XP_020899118
UniProt:
A0A913X560
LinkDB
All DBs
Position
Unknown
AA seq
102 aa
AA seq
DB search
MAAASDRKEKKSIFDISKYLDKGVRVKFQGGREASGILKGFDALLNLVLDNTTEYLRDPD
DPLKLTEETRRLGLVVCRGTAVVLVCPVDGMEAIANPFIQAE
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcatctgatagaaaggaaaagaaaagtatatttgatatttcgaagtacctt
gataaaggtgttagagtaaaattccaaggaggaagagaagcgagtgggatactcaagggt
tttgatgcactgttaaacttagtactagacaacactacagaatacttaagagatccagat
gacccactaaaaytgacagaagagacaagacgtcttggtttagttgtatgtagaggaact
gctgttgtccttgtttgtcctgtagatggaatggaagctattgcaaacccttttattcaa
gctgaatag
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integrated database retrieval system
