Exaiptasia diaphana (Aiptasia): 110237956
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Entry
110237956 CDS
T05080
Name
(RefSeq) putative ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110237956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epa03019
]
110237956
03036 Chromosome and associated proteins [BR:
epa03036
]
110237956
Enzymes [BR:
epa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110237956
Messenger RNA biogenesis [BR:
epa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110237956
mRNA degradation factors
5'-3' decay
Decapping complex
110237956
Chromosome and associated proteins [BR:
epa03036
]
Eukaryotic type
Gene silencing
piRNA pathway
110237956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
CDC37_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
110237956
NCBI-ProteinID:
XP_020899244
UniProt:
A0A913X5H2
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MSVMATKTEAAIIPGNKNSKPDSSENWKAKLNIPDKDNRIKTTDVTATKGNEFEDYCLKR
ELLMGIFEKGYENPSPIQEESIPVALAGRDILARAKNGTGKTAAYMIPLLERIETAQNAI
QALILVPTRELALQTSQECKVLGKHLDVQAMVTTGGTSLKEDIMRLYNKVNVIVATPGRI
LDLMKKGLADMSKCKILVMDEADKLLSMDFKNLLEDIISYLPSNRQILLYSATFPVSVKQ
FRDIHLMKPYEINLMDELTLFGVTQYYAYVKEKHKVHCLNTLFNKLEINQAIVFCNSVKR
VELLAKKLIELGYSCFYIHARMAQAYRNRVFHDFRQGHCRNLVCSDLFTRGIDVQSVNVV
VNFDFPQNAETYLHRIGRSGRFGHLGLAINMVTEDDEEDLCKIEKELGTEIKPIPSDIDK
KLYVAEYQHQQRLQQADGK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtaatggcaaccaaaacggaagcagcaattatacctgggaacaaaaattcaaaa
ccagattcttccgaaaattggaaagcaaagctgaatattcccgataaagacaaccgtata
aagacaactgatgtaactgcaactaaaggaaatgaatttgaagattattgcttgaaacga
gaactacttatggggatatttgagaagggctatgaaaacccatctcctattcaagaagaa
agtatcccagtagccttggctgggagagatattctggccagagcaaagaayggcactgga
aagactgctgcatayatgattcccctcttggaaaggattgaaackgcacaaaatgcaatt
caagccctgattttggttcctacaagagaacttgctttacagacatcacaagagtgtaaa
gttctaggcaaacacttagatgtacaggctatggtaacaactggtggracaagcttgaaa
gaagacattatgagattgtataacaaagttaatgtaatagtagctactccaggacgtatt
ctagatttgatgaagaaaggcttagctgacatgtccaaatgtaaaatactagtgatggat
gaggcggacaaactactctcaatggatttcaaaaaccttcttgaggatatcatctcatat
ttgccaagcaaccgacagattctattgtactcagccacatttcctgtttcagtgaaacag
tttagagacattcatcttatgaaaccgtatgaaattaacctcatggatgaattgacattg
tttggtgttacccagtactatgcatatgtgaaggaaaagcacaaagttcattgcttgaat
actctttttaacaagcttgaaatcaaccaagccattgtgttctgcaattcagtaaaacga
gttgaactgcttgccaagaagttgatagaattaggatattcttgtttctatatccatgca
cgtatggcacaagcctacagaaatagagtattccatgattttagacaaggacattgtaga
aacctggtgtgctcagatcttttcacccgtggtattgatgtgcagtctgttaatgtggtt
gtgaactttgactttcctcaaaacgctgaaacatatttgcatcgtattggacgttctggt
cgctttggacacttaggtcttgcaattaacatggtcactgaggatgatgaagaggacctc
tgcaaaattgaaaaggaacttggaacagaaatcaaacccattccatcagacattgacaag
aaactgtatgtagctgagtatcaacatcaacaaagacttcaacaagcagatggaaaataa
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