Exaiptasia diaphana (Aiptasia): 110240375
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Entry
110240375 CDS
T05080
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110240375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epa03019
]
110240375
Messenger RNA biogenesis [BR:
epa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110240375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Phage_TAC_1
Motif
Other DBs
NCBI-GeneID:
110240375
NCBI-ProteinID:
XP_020901844
UniProt:
A0A913XB37
LinkDB
All DBs
Position
Unknown
AA seq
231 aa
AA seq
DB search
METESVHACELRTMLSEQGLLNQADGSAVFKQGDTQVMAAVYGPVEVRMNKELLDKALVE
VIFRPKVGLPGCSEKMMEQLIRQSCEPVILTTLHPRSSMTIIVQVIHDSGSLLSCAINAA
FLAMIDAGYPMKSTICSVTCAITNNDEIQLDPNLQQQKEASSVMTFVFDGINKNVMTSST
KGEYAIEQYNKCLLASVSAADHILQFFRQSVERKLSRDAKYQCIDSNSMDS
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaaagtgtacatgcatgtgaattacggacaatgcttagtgaacaagggctt
ttgaatcaagcagacgggtcagcagtgttcaagcaaggtgatacacaggttatggcagcg
gtttatggtcctgttgaagtaagaatgaataaagaattgcttgataaagctttggtggaa
gttatctttcgacctaaagttggactaccaggttgttcagaaaagatgatggaacaacta
ataagacaaagctgtgagccagtgatactaacaactctgcacccaaggtcttcaatgaca
atcattgtacaagtcatacatgattcaggatctctcttgtcatgtgccataaatgcagca
ttcttggccatgattgatgctggttatccaatgaaatctacaatatgctctgtgacgtgt
gcgataacaaataatgatgagattcagctagaccccaacttacaacagcagaaggaagcc
tcatccgttatgacatttgtatttgatggtattaacaagaatgtaatgacatcttctaca
aaaggcgaatatgctattgagcagtataacaaatgtctcttagcaagtgtttctgctgct
gaccacatactacagttctttagacagtcagtagagagaaaactatcaagggatgccaaa
tatcaatgcatagattcaaattctatggattcttga
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