Exaiptasia diaphana (Aiptasia): 110240442
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Entry
110240442 CDS
T05080
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
epa
Exaiptasia diaphana (Aiptasia)
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
epa03041
]
110240442
Spliceosome [BR:
epa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110240442
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
UTP6_C
ARM_TT21_4th
TPR_TmcB
Motif
Other DBs
NCBI-GeneID:
110240442
NCBI-ProteinID:
XP_020901911
UniProt:
A0A913XBC3
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MAAVEDEYRSVEESMENQSHPESGVNGVSDELEKXSEETPSNQVDEVEEVVNEQELKYWK
TVNDNPLDFTSWTYLLQFVEQENKLESARKAFGGFFQRYPYCYGYWKKYADMERKNGNIE
NAKEVFEQGIASIPYSVDLWVHYLNFSSQMTKGQVNGSEIMRSLFERAIATAGYEYRSDK
LWDAYLDWERNQGQLKKVTDIYDQLLTVPTQHYAQHFEKFKTHINSNPVAAVLSTEELLK
MQSEVAAAPPGVAAVTETTPAEEKPGDVEADVKEENAEVKMEEDNDEEDEVAPGTEDLGA
PGDEGIVLSENDPETVAIREKVIAXRAEKYSKLEDEIRKIWVYEEGIKRPYFHVKPLERV
QLKNWKDYLDFELANGDHSKVVVLFERCVIACALYEEFWQKYANYIEQHSLENCHNVYER
ACRIHLPRKPNIHMAWAAFEEQQGNPDLAAAILKELDLWVPGLAIVKLRRXNLERRQGHF
ENACMIYKEAMDETGDEEARSFYXIRYARFLAKVMNDYQKASEVLRDAIEKDKNNNRLYL
QLLDLELSSTPIYEDRIEEVFDLVKSSGLSEDAKQSFSQRRLDFLEDFSPSISKIMKANE
AHGKLYKSKTLPSNGLTTGKKRVSETNGDSSAKVAKSDETVTDVTQAYQATGTEAYDTSA
YTTSSAYTANSAYTANYSAAAAAATAAAYGYTTPVQNQWAGYTAAQPAAYNYNQWYYGQT
APTT
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagttgaagatgagtatcgttctgtcgaagaatctatggaaaatcaaagccat
cctgagagtggggttaacggagtctcagatgaactcgagaaggyctcggaagaaactcct
tcaaaccaagttgacgaagtcgaagaagtcgtaaacgagcaagaacttaaatactggaaa
actgtaaatgataatcctttggatttcaccagctggacrtacttgcttcagtttgttgag
caagagaataagttggagtcagctcgcaaagcattcggtggcttctttcaaagatatccc
tattgctatgggtactggaaaaagtatgctgacatggaacgcaagaatggaaacattgaa
aatgccaaagaggtgtttgagcaagggatagcatctatcccatacagcgtggatctatgg
gttcactatctaaacttctcatcccaaatgaccaagggtcaagtcaatggttcagaaata
atgcgcagtttgtttgaaagagcyattgcaactgcaggatatgaatatcgctccgacaag
ctttgggatgcttatctggattgggaaagaaaccaggggcaactcaaaaaagtcacagat
atttatgaccagttactaactgtacctacacaacattatgcccaacattttgaaaaattc
aaaacacatatcaactccaatccagttgcagcagtcttgtcaactgaagaattactgaaa
atgcagtcagaggtcgctgcagctccaccaggagtagcggctgtaactgagacaacacct
gctgaagaaaagccaggtgatgtagaggctgatgtgaaggaagaaaatgcagaagtgaaa
atggaagaagataatgatgaagaagatgaagttgcaccaggaacagaggatcttggtgct
ccaggggacgaaggaattgtactttcagagaatgatccagaaactgttgccatcagagag
aaagtcattgcarcaagagctgaaaaatatagcaaactggaagatgaaataaggaaaatt
tgggtttatgaagaaggcatcaaaaggccttactttcatgtcaaacctttagaaagagtm
caactcaaaaactggaaagactatctagactttgaacttgctaatggagatcacagcaag
gttgttgtgctttttgagcgatgtgtcattgcatgcgctttatatgaagaattttggcag
aaatatgccaattatatygagcaacatagtctggagaactgtcataatgtttacgagaga
gcatgccgtattcatttgccaagaaaacctaatatccacatggcctgggctgcctttgag
gagcaacaaggtaaccctgatttagctgctgcaattcttaaagaactagacctttgggtg
ccaggacttgccattgtgaaacttcggcgaaycaatctggaaagaaggcaaggtcacttt
gagaatgcttgtatgatttacaaagaagcaatggatgaaactggtgatgaagaggcaagg
tcgttctatkcaattcgttatgcgagatttcttgccaaggtaatgaatgactatcaaaaa
gcatctgaagtgttaagagatgctattgaaaaagacaagaataacaacagactctattta
caacttctcgacctggaactcagttcaactcccatttatgaagacagaatagaagaagta
tttgatttggtgaaaagcagtggtttatcagaagatgcyaagcaaagcttttctcaaaga
cgtcttgattttttggaagattttagtccaagtatcagtaagataatgaaagccaatgaa
gcgcatggtaaactttataagtcaaaracacttccttcaaatggtcttactacaggraag
aaaagagtctcagaaactaatggtgattcttcagcgaaagtcgccaaatcagatgaaaca
gttacagatgttacacaagcatatcaagcaacaggcaccgaagcttacgatacatcagct
tacacaaccagctcggcatatactgctaactcggcatatactgccaactatagtgctgct
gctgctgccgctactgctgcagcatatggttayaccacacccgtacagaaccagtgggct
ggatatacagctgctcaaccagctgcatacaattataaccaatggtattatgggcaaaca
gctccaaccacgtag
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