Exaiptasia diaphana (Aiptasia): 110240465
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Entry
110240465 CDS
T05080
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
epa
Exaiptasia diaphana (Aiptasia)
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
epa03016
]
110240465
Enzymes [BR:
epa01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
110240465
Transfer RNA biogenesis [BR:
epa03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
110240465
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
110240465
NCBI-ProteinID:
XP_020901940
UniProt:
A0A913XBF1
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MADEVEXKEDEKITLFSDGNREVFVWNAEDVFKLRSNYRIIGSLVGSLPRKPKQNVCLSL
PLLLSEDETTLLLQKNLARLVXSQTNLPFPSQEEVKVFHELREQSIKEQIELFSEENKEK
EKEMRDYIEDARKRKKRKGRKRRMADNEHILKPEKFPKTEDSEDLFHDNIRTQGNVLPDT
ISIEXVGXTKANFPKKXDENTVRDVXXKESXXLTADSLCPXDIPTSXDSEMTSATDKKSH
NTSKTSEAQDIAQKEKXCVIQIPTKMPTCKINDLPIQQWHYPTTEQEQIKFKIFKDLWEX
GYYLTSGSKFGGDFLAYPGDPFKFHSFFVVMVIPQSKMIGMLDLIAIGRLAATVKKTAVL
GTVDSNGDVVYTSIKWSGIS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaagtcgaagraaaagaagatgagaaaattactttattttctgatggaaat
cgcgaagtttttgtttggaacgctgaggatgtttttaagcttagatcaaactatcgtata
attggctctctagttggttctcttccaagaaaacccaaacagaatgtatgtttgtctttg
ccattgcttttgtcagaagacgaaacaactttgcttttacagaagaacttagcacgcctt
gtgraaagtcaaacaaatcttccatttccttctcaagaagaagtaaaggtatttcatgaa
cttagagaacaaagcattaaggaacaaatcgaactttttagtgaagaaaacaaagagaaa
gaaaaagaaatgagagattatattgaggacgcaaggaaaaggaagaaacgaaaaggaagg
aaaagacgtatggcagataacgagcatatactaaaaccagagaaattccccaaaacagag
gatagtgaagatctytttcatgataacattaggacacaagggaatgtgctgccagataca
atttccattgaacrtgtaggcaytactaaagcaaactttccaaaaaaawttgatgagaat
actgttagagatgtgrcamaaaaagaaagtcakkttttaactgctgattcactatgccca
gawgacattccaacctcakttgactctgaaatgacttctgctacagataagaagtcacac
aacacctcaaaaacttcagaagcacaagacatagctcaaaaagaaaaarcttgtgttata
caaataccaacaaaaatgccaacatgcaaaataaatgatctaccaatacaacaatggcat
tatcctacaacagaacaagaacaaattaagttcaaaatytttaaagatttgtgggaamaa
ggatattatctcacttcaggctcaaagtttggtggtgattttctagcctatcccggggat
cctttcaaatttcattcattttttgtcgtcatggtaataccacaatctaagatgattgga
atgctagatttgatagcaattggacgattggctgctactgtgaagaagacggctgtgtta
ggtacagtagatagtaatggcgacgttgtttatacatcaatcaaatggagtggaataagt
taa
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