Exaiptasia diaphana (Aiptasia): 110240663
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Entry
110240663 CDS
T05080
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03020
RNA polymerase
epa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110240663
09124 Replication and repair
03420 Nucleotide excision repair
110240663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
epa03021
]
110240663
03400 DNA repair and recombination proteins [BR:
epa03400
]
110240663
Enzymes [BR:
epa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110240663
Transcription machinery [BR:
epa03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110240663
DNA repair and recombination proteins [BR:
epa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110240663
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
110240663
NCBI-ProteinID:
XP_028515345
UniProt:
A0A913YIY0
LinkDB
All DBs
Position
Unknown
AA seq
1089 aa
AA seq
DB search
MSGMYDHDDDAGYGEDEGEDITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQ
RIVEDSPEIDLQAESQHMTADTEIPAKYVLKFEQIYLSKPTHWEKDGAPSAMMPNEARLR
NLTYSAPFYVDITKTRIKENEEPQTVTHSKMFIGKIPIMLRSTYCLLSNLNDRDLTELNE
CPLDPGGYFIINGSEKVLIAQEKMATNTVYVFSKKDSKYSYTAEIRSCLEHSSRPTSSMW
VSMLAKGSQSGRRSAIGQRIVGSLPYIRQEIPIMIIFRALGFVADRDILEHIIYDFEDQE
MMEMVKPSLDEAFVIQEQNVALNFIGSRGARPGVTKEKRIKYAKEILQKEMLPHVGVSDF
CETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFRNLMKEVR
MYAQKFIDRGKDFNIELALKPKVITDGLRYSLATGNWGDQKKAHSSRAGVSQVLNRLTFA
STLSHLRRLNSPIGREGKLAKPRQLHNTHWGMICPAETPEGHAVGLVKNLALMAYISVGS
QPSPILEFMEEWTMENLEEITPSAINNATKIFVNGCWVGIHRDPDQLMSTLRKLRRRMDI
IVSEVSMVRDFREREIRIYSDAGRICRPLLIVENQKLLLKKNHIDMLKEREYNDYSWQEL
VAGGIVEYIDVNEEETVMVAMTPDELVEKGQAYCSTYTHCEIHPSMILGVCASIIPFPDH
NQRSYRDQESKRGLDQEETFEKPTRDQVTGMRNAVYDKLDDDGLVAPGTRVSGDDVIVGK
TTTLPDNDDELEGSTKRYSKKDSSTFLRPSETGIVDQVMVTINQEGYKFTKIKVRSVRVP
QIGDKFASRHGQKGTCGITYRQEDMPFTCEGLSPDVIINPHAIPSRMTIGHLIECLQGKV
SANKGEIGDATPFNDAVNVQKISQLLNDYGYHLRGNEVLYSGFSGRKLNTQVFLGPTYYQ
RLKHMVDDKIHSRARGPLQILTRQPMEGRSRDGGLRFGEMERDCMIAHGAAQFLNERLFE
VSDPYSCHVCNLCGLIAIANLRNNTFECRGCKNKTQISRIRMPYAAKLLFQELMSMSIAP
RMMVCDPVK
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcatgtatgaccatgatgatgatgcaggttatggagaggatgagggtgaggac
attacgccagatttatggcaagaagcttgctggatcgttattagttcgtatttcgacgag
aaaggtcttgtcaggcaacagttggactcgttcgacgagtttattcaaatgtcagtgcag
agaatcgtggaagattcaccagaaatagatctccaggctgagtcccagcatatgacagca
gacacagagatccctgcaaaatatgtgttaaagtttgaacaaatctacctgtccaagcct
actcattgggaaaaagatggcgcaccaagtgccatgatgccaaatgaagccaggcttcga
aatctaacgtattcggcaccattttacgtagacatcacaaaaacaagaatcaaagagaat
gaagagccacagacagttacccacagcaaaatgttcatcggcaaaatccctatcatgctt
agatcaacatactgtctcttaagtaacctcaatgatcgtgatttaacagaattaaatgag
tgcccattagaccctggtggctactttatcattaacggctctgagaaagtcttaattgct
caagagaaaatggctactaacactgtctacgtcttctcgaaaaaggattccaagtattcc
tacactgccgagattcgttcatgtcttgaacattcatcaagaccaacaagctccatgtgg
gtttctatgcttgctaaaggaagccaaagtggtcgtcgtagtgctatagggcaaaggatt
gtgggttcattgccgtatataaggcaggagattcctataatgattatattcagagcgctt
gggtttgttgccgatagagatatcttggagcatattatttatgattttgaagaccaggag
atgatggaaatggttaaaccatctttggatgaagcctttgtaatccaggaacagaatgtt
gcattgaacttcattggatcccgtggagcaagacctggtgtgactaaagaaaagagaatt
aagtatgccaaagaaatcctacagaaggaaatgttaccccatgttggagtcagtgatttc
tgcgagactaagaaagcttacttcttggggtacatggtacacagacttttattggcagcc
ttagggagaagggaattggatgaccgtgatcactatggtaacaaacgtttggatctggca
ggaccattactagcgttcttgtttagagggttgtttagaaatcttatgaaagaagtacgg
atgtatgcacagaagtttatagacagaggaaaggatttcaacattgaacttgcactcaaa
cccaaggtcatcactgatggacttcggtactccctggctacagggaactggggtgaccag
aaaaaagcccactcctcaagagcaggtgtctcccaggtattaaacagactaacatttgcc
tctacgctatctcatctacgacgtcttaactctcccattgggcgagaaggaaaactagca
aagcctcgacaactgcacaacacgcattggggtatgatatgtccagccgagacaccagag
gggcatgctgtaggacttgtgaagaacttagcccttatggcttacatttctgtgggttca
caacctagtcctattttagagtttatggaggaatggacaatggaaaaccttgaagagatt
acaccatcagccatcaacaatgctacaaagatttttgtgaatggttgctgggttggtatc
catcgtgaccctgatcagttaatgagtacactgagaaagttaaggagacgtatggacatc
attgtatctgaggtctccatggtacgggactttagagaaagagaaataagaatctactct
gatgctggtcgtatttgccgtcctctgctgattgtagagaatcagaagttactattgaaa
aagaatcatattgatatgttaaaggaaagagaatataatgattatagctggcaagaactt
gttgctggtggcattgtagaatacattgacgtcaatgaagaagagactgtcatggttgcc
atgacaccagatgaacttgtagaaaaaggccaggcbtactgttcaacatacacccactgt
gaaatccatccatcaatgattcttggtgtctgtgcgtccatcattccttttcctgatcac
aatcagagatcctatcgtgatcaagagtccaaaagaggtctagaccaagaggagactttt
gagaaaccaacaagggatcaagtgacaggaatgcgcaatgcagtttatgacaarcttgat
gatgatggtctagttgcaccaggaactcgagttagcggtgatgatgtcattgttggaaag
acaacgactctacctgacaatgatgatgagttggaaggttcgacaaaaagatattcaaag
aaagattcaagtactttcttgcgtcctagtgaaactggaatagttgaccaggttatggtc
acaatcaaccaagaaggttacaagtttacaaagattaaggtgcgttctgttagagtccca
caaattggagacaagtttgccagtcgtcatggtcaaaaaggaacatgtggaattacatac
agacaagaggacatgccgttcacttgtgaaggcttatcacctgatgtcatcattaatccc
catgctattcctagtcgtatgactattggtcacttgattgaatgtctccagggcaaggta
tcagcgaacaagggcgaaataggtgacgctacaccttttaacgatgctgtcaacgtacag
aaaatatcccagctacttaacgactatggttatcatcttagagggaacgaggtattgtat
agcggattttctggacgtaaactcaacactcaggttttccttgggccgacgtattaccaa
cgacttaagcacatggttgacgacaagatccactctcgtgctcgtggtccattacagatc
cttaccagacagcctatggaaggacgatcacgtgatggtggtcttcggttcggtgagatg
gaacgtgattgtatgattgctcatggtgccgcacagtttctcaatgagcgtctgttcgaa
gtgtctgatccatacagttgtcatgtttgtaatctttgtggattaatcgccatcgctaat
ctacgtaacaacacttttgaatgtcgtggatgcaagaacaagactcagatttcaagaatt
cgaatgccgtatgcagccaagctactgttccaggagctgatgtccatgagcatcgcccct
cgaatgatggtatgcgatcccgtcaagtag
DBGET
integrated database retrieval system
