Exaiptasia diaphana (Aiptasia): 110241096
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Entry
110241096 CDS
T05080
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110241096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epa03019
]
110241096
Messenger RNA biogenesis [BR:
epa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110241096
mRNA degradation factors
5'-3' decay
Lsm complex
110241096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF5321
Motif
Other DBs
NCBI-GeneID:
110241096
NCBI-ProteinID:
XP_020902593
LinkDB
All DBs
Position
Unknown
AA seq
138 aa
AA seq
DB search
MSFLPGTASLIKEIDKKLLVVLRDNRTLIGYLRSIDQFANLVLQGTIERIHVGDMYGDIP
RGIFVVRGENVVLLGEIDQEKENKSILKEVSVDKILEAQRAEQIEQEEQEKAKNKARAQQ
GMPVNSSETYLTHDDRFI
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgagttttctaccaggcacagcaagccttatcaaagaaattgacaaaaagctcctggta
gttctaagggacaatcgaacgcttataggttatcttcgaagtatcgatcaatttgctaac
ctggtacttcaaggcacaatagaaagaatacatgttggagatatgtatggtgacattccc
agaggaatatttgttgtgagaggagaaaatgttgttcttctaggtgaaattgaccaagaa
aaggaaaacaagtcaattctaaaagaagtttcagttgacaaaatattggaagctcaaaga
gcagaacaaattgaacaagaggaacaagaaaaggccaaaaacaaggcaagagcacagcaa
ggcatgccagttaattcctctgaaacatatttaacacatgatgatcgatttatttaa
DBGET
integrated database retrieval system
