KEGG   Exaiptasia diaphana (Aiptasia): 110242238
Entry
110242238         CDS       T05080                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
epa  Exaiptasia diaphana (Aiptasia)
Pathway
epa03030  DNA replication
epa03410  Base excision repair
epa03420  Nucleotide excision repair
epa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:epa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110242238
   03410 Base excision repair
    110242238
   03420 Nucleotide excision repair
    110242238
   03430 Mismatch repair
    110242238
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:epa03032]
    110242238
   03036 Chromosome and associated proteins [BR:epa03036]
    110242238
   03400 DNA repair and recombination proteins [BR:epa03400]
    110242238
DNA replication proteins [BR:epa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    110242238
  DNA Replication Termination Factors
   ELG1-RFC complex
    110242238
Chromosome and associated proteins [BR:epa03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    110242238
DNA repair and recombination proteins [BR:epa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     110242238
  Check point factors
   HRAD17(Rad24)-RFC complex
    110242238
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 AAA_16 Rad17 AAA_11 AAA_22 AAA_30 AAA_assoc_2 DUF815 AAA_14 DNAX_ATPase_lid ATPase_2 RuvB_N ResIII SLFN-g3_helicase Mg_chelatase AAA_24 AAA_19 AAA_28 AAA_5 Gp44_lid bpMoxR AAA_7 AAA_3 AAA_23 RNA_helicase Hydantoinase_B
Other DBs
NCBI-GeneID: 110242238
NCBI-ProteinID: XP_020903855
UniProt: A0A913XG21
LinkDB
Position
Unknown
AA seq 353 aa
MDAFFKGRTASTSKKLEGESSTKKTSVPWVEKYRPRSVDEVAHQEEVVKVLKKTLEGADL
PNLLFYGPPGTGKTSTILAVARQLYGHDLYKSRVLELNASDERGIQVVREKVKSFAQLAA
SAVRSDGKPCPAFKLXILDEADSMTPSAQAALRRTMEKQTRTTRFCLICNYVSRIIEPLT
SRCSKFRFKPLDSTVLETRLKEICEKEEIXYXDQAIQEIIRTSEGDMRKAITYLQSAHRL
KSDSGICGEDIVEIAGVIPKKMLLELLEACKTDSYEKLESAVKDIIAEGHAASQLISQIL
DEIIQMEELTDHQKSEIXEKLAVVDKCLIDGADEYLQVLSLSSVMMQQFCHAG
NT seq 1062 nt   +upstreamnt  +downstreamnt
atggatgcattttttaagggtcgcacagcatcaacctcgaaaaaactagaaggagagtca
tcgaccaaaaagacttctgttccttgggtagaaaaataccgaccaagatctgtggacgaa
gtagctcatcaagaagaggtagtcaaagtgctcaaaaagacattagagggagctgatctg
cctaatttgctattttatggtcccccagggacaggaaaaacgtccactattctggctgta
gcaagacagttgtatggacatgatctctacaagtccagagtgttagagctaaatgcatca
gatgaacgtggaatacaggttgttagggaaaaggttaaaagctttgctcagttagcagca
tcagcagtgagatcagatggaaaaccctgccctgccttcaagttgrtcattctagatgaa
gctgactctatgactcccagtgcacaggctgcattgagacgtacaatggaaaaacaaaca
agaacaacaagattttgtctaatctgtaattatgtcagtcgaataatagaaccattgact
tcacgttgctctaagtttcgattcaagcctctcgattcaacagtgctagaaacaagactg
aaagaaatatgtgaaaaagaagaaatamattatgamgaccaggcaatccaggaaattatc
agaacatcagaaggagatatgagaaaggctatcacatacttacaaagtgcacacagactg
aaaagtgattctggtatttgtggtgaagatatagtagagattgcaggggtcattccaaag
aaaatgctcctagagttgttagaggcttgtaaaacagattcatatgaaaagttagagtca
gcagttaaggacattattgctgaaggtcatgctgcttctcaacttattagtcagattctt
gatgaaataattcaaatggaagagctaacagatcaccagaaatcagaaataaytgaaaaa
cttgcagttgtagataaatgtctgatagatggagctgatgaatacttacaggttttgagt
ctttcatctgtcatgatgcaacagttttgtcatgctggttag

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