Exaiptasia diaphana (Aiptasia): 110243460
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Entry
110243460 CDS
T05080
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110243460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epa03019
]
110243460
Messenger RNA biogenesis [BR:
epa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110243460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
110243460
NCBI-ProteinID:
XP_020905231
UniProt:
A0A913XJD3
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Position
Unknown
AA seq
641 aa
AA seq
DB search
MRAHTHAVKFKMADGEDDEAFLYGNDEDEKKGETEEEIKDVSEVKPDEAEESKENVKPEE
SEPVENGEDKTADDKDDDDAKEAGELSNEDDEDDDDDDDDDDDDVQVTIDEINTSGTGYG
TPYTTPVNWNFKGSXVGSASKGAATPAAGSKHLDLNAEGTVNGVGIYEFDLESAEERPWR
KPGADITDYFNYGFTEDTWKQYCEKQRRMRLELSMQKKIFAHHAGAPAPTGQGDLTAVIT
ADVRTRKAGPPPERRMEGSIDVIGAVGSRVESRRHQDEDMLPPHMLPDGMSKRGFPGPPM
FNVPTSDPSMGPPQHLGGGPPVSSMAGPPPMHQGVPPRFPPGGPPGGPGGMPGMLPPGMQ
QPPPGMTQPPAGFPPDGMPHDSMGFPGRGMGRGRGRGFHPGMPGMPPPGEFPPGMDERGA
RIPFEDGMPHFYPGDPSVQPFPPMMGPPPHGIPWEAGMGRGFMPNFRDQFPVGMPRPGGE
SPGRGGRSDDDSEYGSSGDERRREREHKKRDKDKDRERSREHRERTRDRHSDRDRSPRRE
RDRERRDRDRESRRHRDRDKDRDKGSDRDREKREERSSRRERSKEQREKKRHKGSSEVQS
ADGQEEGEVVSKRRSRRTRESKQAETKPEXAEQEEGQLSSP
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcgcatacacatgctgtcaaattcaagatggcggacggcgaagatgatgaggcc
ttcttgtatgggaacgatgaagatgagaaaaagggagaaacagaggaggaaatcaaagat
gtcagtgaagttaagcctgatgaagctgaagaatcaaaagaaaatgtaaagccagaagaa
agtgaacctgtagaaaatggwgaagataaaacagcagatgataaagaygatgatgatgca
aaggaagctggtgaattgagcaatgaagatgatgaagatgatgatgacgacgacgatgat
gatgatgatgatgttcaggttactattgatgaaataaacacttcagggacaggctatggg
acaccatatactacacctgtgaactggaacttcaagggaagcrcmgttggttctgctagc
aagggtgctgctacacctgctgctggtagcaaacacttggatttgaatgcwgaaggaaca
gtaaatggtgttggaatttatgaatttgacttggaatcagcagaagaaagaccttggaga
aaaccaggtgctgacataacagactatttcaactacggttttactgaggatacttggaaa
cagtactgtgaaaagcaaagaagaatgagactggaattaagcatgcagaaaaagattttt
gcacaccatgctggtgcaccagcccctacaggtcaaggtgatttaacagcagttatcaca
gctgatgttcgtactcgtaaagcaggaccaccacctgagaggagaatggagggcagtatt
gatgtcataggagcagtaggttcacgagttgaaagtcggcggcatcaagatgaagacatg
ttgccccctcacatgttgcctgatgggatgtcaaaacgaggttttccaggtcctcctatg
ttcaatgtaccaacatctgatccctctatgggaccacctcagcacttgggtggtggccca
ccagtatcatcaatggctggccccccaccaatgcaccagggagtgccaccacggttccca
ccaggaggaccaccaggtggcccaggaggcatgccagggatgttaccaccaggtatgcag
cagccccctccaggcatgacccaacctcctgcaggcttcccacccgatggaatgccccat
gattcaatgggttttcctggtcgtggtatggggcgtggcaggggtagaggatttcatcct
ggaatgccaggaatgcctcctcctggcgagtttcctccaggaatggacgaaagaggagcg
aggattccctttgaagatggtatgccgcatttctacccaggagatccctcagttcagccg
ttccctcccatgatgggrcccccaccccatggcattccctgggaagctgggatgggacga
ggatttatgcccaattttcgagaccagtttcccgtcggtatgcctagaccaggcggagaa
agcccgggacgaggaggtcgtagtgatgatgatagtgagtacggtagcagtggagacgaa
agacgaagagaacgagaacacaaaaaaagagacaaagataaagacagagagagaagtaga
gaacacagagaaagaactcgagatagacattccgaccgtgaccggtctccgcgwcgagag
cgtgaccgcgagagacgtgaccgggatcgagaaagcagacgacatcgtgaccgtgayaaa
gatcgtgacaagggtagtgacagagacagagaaaagcgtgaggagcgatcaagtcgaagg
gaaagatcgaaagaacaacgagaaaaaaaacgtcacaaaggctccagcgaggttcaaagt
gctgatggacaagaagaaggagaggtcgtatcaaaacgaagragtcgtagaactcgtgaa
tccaaacaagcagaaacaaagccagaacytgctgaacaggaggagggacaactatcttca
ccgtga
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