Exaiptasia diaphana (Aiptasia): 110243939
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Entry
110243939 CDS
T05080
Name
(RefSeq) ATP-dependent RNA helicase DDX1 isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
epa
Exaiptasia diaphana (Aiptasia)
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
epa03041
]
110243939
03016 Transfer RNA biogenesis [BR:
epa03016
]
110243939
Enzymes [BR:
epa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110243939
Spliceosome [BR:
epa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110243939
Transfer RNA biogenesis [BR:
epa03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
110243939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
110243939
NCBI-ProteinID:
XP_020905750
UniProt:
A0A913XJE7
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MAGHFSEFGLLPEICKAVDEMDWLLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLP
IIQIVHENVRDAMAGKTPKASPQGDGGSTGFKMNPFDRDESFAISQDGLLCQSREMYKWQ
GCRSTLGVKKGKYYYEATVTDEGLCRVGWSTSQATFDLGTDRDGFGFGGTGKKSYGRQFD
SYGEAFGINDVIGCFIDLQDDYTIKFSKNGVDFGVAFEIPDEMDGKTFFTAVVLKNAEMS
FNFGDKPFKYPPKGQYLALSKAPKNATATSNIATGGAAQSKPGKFSNKCAPSAIIIEPSR
ELAQQTHHQIQLFAKQLPDPKIKSVLLVGGENTKDQIRAINDGVDIITGTPGKLGDFIQT
DKISLHQVNFFILDEADGLLAQGNNDLIMKIYSKIPKTGPTGKRLQIITCSATLHSFDVK
KLADRIMHFPTWVDLKGQDSVPETVHHVVCHIDPRSDMTWKNLKNPVRTDGIHKKDKITG
QTPEALSEAVKMLKAEYLKRAIDEHKMDTAIIFCRTKIDCDNTEQYLLSYGGGARAMVNQ
YSCVVLHGDRSPQERKANLQKFKDNEVRFLICTDVAARGIDIKGVPYVINVTFPDDKQNY
VHRIGRVGRAERMGLAISLISDVKEKVWYHVCSSRGKGCFNTRLKEQGGCAIWYDEIQYL
GDVEEHLGESIPVVSSNLKVTANEFDGKVVYGEKRGKGSSFETHAAEMAPSVRDLASLEL
QAQSSFLGLKHRKWANF
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcatttctcagaatttggcttactgcctgagatatgcaaagctgttgatgaa
atggattggctcctgcccactgacgtccaggcagaagctattcccctcattctgggaggt
ggtgatgttcttatggctgcagaaacagggagtggaaaaacaggagctttctgtttgccc
atcattcaaattgtccatgagaatgtcagggatgccatggcaggaaaaacaccaaaagct
tccccacaaggagatggaggttcaacaggatttaaaatgaatccatttgacagagatgaa
agcttcgcaattagtcaggatggattactatgtcagagccgagagatgtacaaatggcag
ggctgcaggtcaacattaggtgtcaaaaaaggaaagtactactacgaggcaactgtcact
gatgaaggtttgtgccgtgttggttggtcaacttctcaagccacctttgatttagggact
gatagagatggctttggttttgggggaactggtaagaaatcctatggaagacaatttgat
tcatatggagaggcatttggtataaacgatgtgattggatgcttcattgacctgcaagat
gactacaccatcaagtttagcaaaaatggagttgactttggagttgcatttgaaatccca
gatgaaatggatggaaaaacattctttactgctgttgtattaaagaatgcagaaatgagc
ttcaattttggtgacaaaccgttcaaatatccaccaaagggacagtacttggctttgtcc
aaagcaccaaagaatgcaacagcaacgtcaaatattgcaacaggaggtgctgcccagagc
aagccaggcaaattctccaacaaatgtgcaccctcggccattatcatagagccatcaaga
gaattagcacaacagacccaccatcaaatccagttgtttgcaaaacagcttcctgatcca
aaaatcaagtcagtgttattggttggtggagagaatacaaaagaccaaatcagagccata
aatgatggggttgatatcatcactggtacacctggtaaactgggagacttcatacaaaca
gacaagataagtttacatcaggttaacttcttcattctggatgaagcggatggtttactt
gcccaagggaacaatgatctaattatgaaaatctacagcaagataccaaagacaggacca
acaggcaaacgattacagatcatcacatgttcagctactctgcattcatttgatgtcaag
aagttagctgatcgtatcatgcatttccctacatgggttgacttgaaaggacaggacagc
gtccctgagacggtccatcatgtggtctgccatattgatcctcgctctgacatgacatgg
aaaaatctcaagaatccagtacgaactgatggaattcacaagaaggataagataacagga
cagacaccagaggccctttctgaagctgtcaagatgctcaaagctgaatacctcaagaga
gccattgatgagcataaaatggatactgctatcatcttttgtcgaacaaagatagactgt
gataacactgaacaataccttctttcttacggtggaggagcccgtgccatggtcaatcag
tattcttgtgtagttcttcacggtgatagatcacctcaagaacgaaaggcgaatttgcaa
aagttcaaggacaacgaagtgaggtttttgatttgtactgatgttgctgcaagaggaatt
gatattaaaggagtaccatatgtaatcaatgtaacattccctgatgataaacagaattat
gtccataggattggtcgagtaggcagggctgaacgaatggggttagctatttctttgatt
tccgacgtaaaagaaaaggtatggtaccacgtttgctctagccgtggcaaaggctgcttt
aatactagactaaaagaacaaggaggctgtgctatatggtacgatgaaatacagtatctt
ggcgatgtagaggaacatcttggtgaaagtatacctgtagtatcctcaaaccttaaagtc
actgctaacgagttcgatggcaaagtcgtttatggggaaaagcgaggcaaagggtcaagc
tttgaaacgcatgcagccgagatggctccttctgtgcgcgacttggctagccttgagctt
caagcacagtcctcattccttggattgaagcatcgtaaatgggcaaacttttga
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