Exaiptasia diaphana (Aiptasia): 110244580
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Entry
110244580 CDS
T05080
Name
(RefSeq) exosome complex exonuclease RRP42
KO
K12589
exosome complex component RRP42
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110244580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epa03019
]
110244580
Messenger RNA biogenesis [BR:
epa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110244580
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
110244580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
110244580
NCBI-ProteinID:
XP_020906444
UniProt:
A0A913XKW1
LinkDB
All DBs
Position
Unknown
AA seq
290 aa
AA seq
DB search
MADASLSSFERNFIISGVQEDFRSDGRSCEDYRYFEIETGIVSNTSGSARLRLSKTDILV
GVKAEIGEPHPTKPSQGRIEFFVDCSSNSSPEFNGXGGDDLAADLSRALERSYRNKSAVD
LHSLSILHGQQCWVLYIDXVVLECGGGNLYDALSLAVKAALHNTSIPNVTVNTDEGEVEL
EISDDPHDVKHLNVHNIPIIITLSKIGLRHVIDASVEEEACSDCHLLVSVNGDGNICSQQ
KIGTGGLDPQTIFEMLESARTAGKTLNKKLLDVLEEESTAQKRRKVGFLH
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgccagtctctcgagttttgaacgcaattttatcatcagtggcgtgcaagag
gattttagatcggatgggaggtcttgtgaagattacagatactttgaaatagagacagga
attgtgtcaaacactagcggatctgcaaggcttagactgtccaagacagatattctcgta
ggagtcaaagcagaaattggagaaccacatccaacaaaacctagtcaaggaagaatcgaa
ttctttgtcgactgttcatcaaattcatcaccagagttcaatggtaraggaggagatgat
ttagcagcagacttgtcaagagctttggaaagatcatatagaaataaatcagctgtagac
ttacattccttatctattctacatgggcaacaatgctgggttttgtatatcgatgycgtg
gttttggagtgtggtggtggtaatctttatgatgctctgtcacttgctgttaaggctgcc
ttacataatacaagtattcctaatgtaactgtcaacacagatgaaggggaagttgaatta
gaaatatctgatgatcctcatgacgtcaagcatttaaacgtacacaatattcctataata
attactctatcaaagattggtttgcgtcatgttattgatgcaagtgttgaagaagaagca
tgtagtgactgccatctcttagtatctgttaatggtgatggtaacatttgtagccagcag
aaaataggaactggtggacttgacccacaaactatatttgaaatgctagagagtgcaaga
actgcagggaaaacattgaacaagaaattattagatgttcttgaagaagaatctacagca
caaaaaagaagaaaagtgggatttctccattaa
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