KEGG   Exaiptasia diaphana (Aiptasia): 110244728
Entry
110244728         CDS       T05080                                 
Name
(RefSeq) collagen alpha-1(I) chain
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
epa  Exaiptasia diaphana (Aiptasia)
Pathway
epa04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:epa00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110244728
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:epa00536]
    110244728
Glycosaminoglycan binding proteins [BR:epa00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   110244728
SSDB
Motif
Pfam: Collagen COLFI Laminin_G_2 Laminin_G_3 Laminin_G_1
Other DBs
NCBI-GeneID: 110244728
NCBI-ProteinID: XP_020906601
UniProt: A0A913XM70
LinkDB
Position
Unknown
AA seq 1638 aa
MAAWTLGIIVGSLILALLSSVHGISSQDVLAATRRRGSDFVWTFGLRDLPNNTTKTSGLC
TKRPRSSGHGFEEDIAYRFDSKYIAISTQELFPRKFPTEYVIMATFRAERDNAGSLFSIL
TSDRQLSLAFTLNPVGLKYLKPDGNIGDVTFPTSLSDGQWHRIAISVGDRAIVMVADCQE
QVRREFVLAKPKDFPKLINTTGITVLGSDFNDGSYFRGVLHDLRIVEDAKKMGLYCLEFI
PDCDRPLPSVVPFKSRRTRQAGGIPERPGTVTIGNTKYIPGEPGDPGPPGEPGDPGRRGL
KGFAGEKGSLGPPGAPGPPGPQGPQGKRGPGGPSIKVVWPGETKGPGARPPASSQMVIPP
ALPGDQGPRGRRGPNGSPGQPGGPGEKGSQGDPGVMGPPGPLGMRGTRGLAGKRGPPGPD
GPRGPPGALGPKGDRGLDGIPGLPGHKGPRGILGPRGDSGDKGEPGARGERGEPGGSGVP
GERGPQGEAGPKGPPGPRGLLGSPGERGPPGPSGPTGPVGAPGIQGIQGMRGPPGPTGIP
GPAGASGPKGEPGKIGMPGFPGSDGLPGYPGIEGPPGPKGNRGPPGPRGPQGYQGPPGPK
GNQGKRGTTGPKGDEGTAGFPGEKGDDGPRGEDGSPGGPGLPGPEGPEGPKGRTGLPGPP
GISGLPGPKGEQGVSGMTGYPGQAGAKGAQGPPGSRGRDGPKGSRGEAGKIGPRGPRGRR
GPRGERGSPGTPGAAGNKGAAGEPGVSGDRGPMGPPGPQGDRGAPGPAGMMGLPGRPGLP
GFPGPRGETGPQGKSGPVGNPGMPGPRGPPGSSGPQGPKGDLGRAGEPGEPGMAGDAGKD
GKKGEPGKAGVPGKDGLPGPAGKTGPKGARGLPGPMGPKGVEGPNGAPGQAGPIGPRGEP
GLPGPQGPNGRPGPTGANGSPGEKGSKGEEGPRGDPGPAGKPGGPGKPGPEGPQGPSGDD
GEKGAAGPAGPSGKKGDRGPKGPPGPPGPVGNPGKSGPQGPPGEQGVQGPVGPRGEKGPD
GGRGPPGPQGQPGVPGVPGPRGQKGERGASGPSGKIGPPGARGARGPAGPKGDQGEVGDP
GANGRVGDKGDRGPKGDSGAPGVAGTPGRPGEPGQKGGRGDPGPQGPQGPRGPPGPSGDT
GPIGPPGPPGPTGPQGPQGAKGSRGQDGEDGAPGKPGPRGAPGRRGDDGPPGPAGQPGEA
GPKGYAGKDGEPGDRGNTGPPGPQGPVGPPGAQGPRGQRGLPGEQGVPGAPGDVGPQGIT
GPPGAVGAVGRKGDKGDKGNSGEKGDKGWNGFLGPTGPSGPQGEKGDQGLPGLIGHPGPK
GDKGDDGPDGPVGPDGPAGPRGRGGGAGSKGDRGALGPRGEPGPVGPPGPPGPPGDVSHL
IAAYMSPNTGTDKGETRRKRSLDEFSDMREPLDDEMLDSIKALRSRIEEIRRPRGDSRGN
PARTCKDLKLCNRAKKDDHYWIDPNNGCTEDAIKVFCNFTSGGETCIYPDNRTRSGERKS
WRKVDGAEWFSEYDGGYEISYKDVGKTQLNFLRLLSEKAVQNFTYYCSGSVAWYDNVAKS
YEKAIRLQGDNDDVIGYTKNRFSIKVVHDGCQNKEKDGKAIFQIVTEDLNQMPIVDFAPG
DLKESLEFGFEVGPICFS
NT seq 4917 nt   +upstreamnt  +downstreamnt
atggctgcttggacattaggtatcatcgttgggtctttaatactggccctgctttcttct
gtccatggtatttcgtcccaggacgtactcgcggcaaccagacgtagaggtagtgacttt
gtgtggaccttcggtctaagagatctaccaaataacacaaccaaaacctctggcctgtgc
acaaaaaggccccgtagtagtggccatggatttgaagaagatatcgcctacagattcgac
agcaaatatattgccatttcgactcaagaactctttccaaggaagtttcccacggaatat
gtgataatggcgacgttcagagcggaacgtgacaacgctggcagtcttttttctatctta
acctctgatagacaactgtcgctggcgtttacactgaatcctgttggcttgaaatacctg
aagcccgacggcaacataggtgatgtaacattccctaccagtctttcagacggacaatgg
catcgaattgcaattagtgtaggagacagggcaattgtcatggtggccgactgtcaagaa
caggtccgccgtgagtttgtgctggcaaaaccgaaagattttccaaaactaataaatact
acaggtattacagtacttggtagtgacttcaacgacggctcgtacttcagaggcgttctt
catgatctcagaatagtagaagacgcgaagaaaatgggactttattgtttggagtttatt
cccgattgtgaccgacccctccctagtgtggttcccttcaagagcagaagaacacgtcaa
gctggyggcattcccgagagaccaggcactgttaccattggcaacacaaaatatattcca
ggagaaccaggtgatccaggtcctccaggcgaaccaggagatcctggtaggcgaggtttg
aaaggttttgctggagagaaaggctccttaggaccaccgggagcacctggaccgccaggt
ccacaaggaccacaaggsaaaaggggccctggaggaccatcaatcaaagtcgtatggcct
ggggaaaccaaaggaccrggagcgcgacctccagcatcttctcaaatggtcattccaccc
gcacttcctggtgatcaaggcccacgcggtcgtcgtggcccgaacgggtccccgggccag
ccgggaggtcctggagagaagggttctcagggtgaccctggtgtgatgggaccaccagga
ccactgggcatgagaggaacaagaggacttgctggaaaaaggggaccgcccggacctgat
ggaccaagaggaccacctggagccttgggaccaaagggtgatagaggcttagacggtatt
cctggtcttcctggtcataaaggtccacggggtatcctagggcctcgtggtgactctggw
gataagggagaacctggtgctagaggagaaagaggagaaccaggaggctctggagtacca
ggagaaagaggaccccaaggcgaggcaggtcctaagggaccacctggaccacgtggtctt
ttgggttctccaggtgaacggggaccaccaggaccatccggtccaacgggtcctgttggt
gctcctggtattcaaggtattcaaggcatgagaggaccaccgggtccaacaggtattcca
ggtcccgccggagccagtggaccaaagggtgagcctggcaagatcggcatgcctggattc
cctggttcggatggcctaccaggctaccctggaatcgaagggccacctggaccaaaaggc
aaccgaggaccacccggaccaagaggaccacagggataccaaggacctcctggaccaaaa
ggcaatcaaggcaaacgtggaacaacagggcctaagggagatgagggaactgcaggattc
cctggagagaaaggagacgacggaccaagaggagaagacggatcacctggtggaccagga
ttacctggcccggaaggaccagaaggacctaagggtcgcactggattacctggacctcct
ggaatatctggactacctggccctaagggagaacaaggcgtttctggtatgactggttat
cctggacaggcgggagcaaagggagcccaaggaccacctggaagtagaggacgcgatggt
cctaaaggatcacggggagaagcaggaaagattggcccacgtggacctcgtggaagacgt
ggtccaagaggagagcgaggaagtcccggtacgcctggtgctgcaggcaacaagggtgcc
gctggtgagcccggtgtatcaggagatcgtggtccaatgggaccacctggaccacaggga
gaccgcggagcacctggtccagcggggatgatgggtcttcctggacgccctggtctacct
ggattccctggaccacgtggtgagacgggacctcaaggcaaatcaggtccagtcggtaac
ccaggaatgccaggaccwcgtggacctcctggaagcagcggacctcaaggaccaaaaggt
gatcttggtcgtgcgggtgagcctggagaacctggaatggcaggggatgctggaaaagac
ggcaaaaagggtgagcctggtaaagcaggtgttcctggaaaagacggattaccgggacct
gccggaaagaccggaccaaagggagccagaggattgccgggcccaatgggaccaaagggc
gttgaaggacctaacggtgcacctggtcaagccggaccgattggaccacgcggtgagcct
ggaytaccaggacctcaaggacctaatggaagacctggtccyacaggagccaatgggagc
cctggagagaagggtagcaagggtgaggagggaccacgtggtgatccaggtccagcagga
aaaccgggaggaccgggtaaaccaggacctgaaggaccacagggtccatctggagatgac
ggtgagaagggtgcagcaggtccagccggaccatcaggcaaaaaaggagaccgcggacca
aagggaccaccaggaccacccggtcccgtcggaaatcccggtaaatctggaccgcaggga
cctcctggcgaacaaggtgtgcaagggccggttggaccacgtggagaaaagggccctgat
ggtggacgaggaccccctggtccccagggacaacctggtgtacctggagttcctggtcca
cgtggacagaaaggagaacgaggygcatccggaccatcggggaagattggaccacctggt
gcacgaggagccagrggaccagctggaccaaagggagatcaaggtgaagttggcgatccc
ggtgctaatggaagagtcggtgataagggtgaccgtggaccaaaaggtgattccggagcc
cctggcgttgctggaacacctggtcgacctggtgaaccaggacagaagggaggacgtgga
gatcctggaccgcagggaccacagggaccccgtggmcctcctggaccatctggagatact
ggaccaattggcccaccrggacctcctggaccaactggaccccaaggcccacaaggagct
aagggtagtcgtggccaagacggagaagatggcgcacctggaaaacccggcccacgcggt
gcaccaggtcgccgtggagatgatgggcccccaggaccggctggccaaccaggtgaagcc
ggtccaaaaggatatgccggaaaagatggagaacccggagacaggggtaacactggaccg
ccaggacctcaaggtcctgttggaccccccggagcacagggacctcgtggacaacgcggt
ttacctggagagcaaggtgttccgggcgctcctggtgatgtaggaccgcaaggcattact
ggtcctcccggagctgttggcgcagttggcaggaaaggcgataagggtgataaaggaaat
tcgggagagaaaggagacaagggctggaatggattcctcggtcccacaggaccttctgga
ccgcagggagagaagggagatcaaggcctcccaggtttaatcggccaccctggacccaag
ggagacaagggtgacgatggacccgatggacctgtcggaccagatgggcctgcaggacca
agaggaagaggtggtggtgctggatccaaaggagacagaggcgcattaggaccaagggga
gaacccgggccagtgggaccgcctggaccaccaggaccacctggagatgtgagtcacctc
attgcagcgtatatgtcacccaacactggaacagacaaaggagagaccagacgaaaacga
tctttagatgaatttagtgatatgcgagaaccattggacgatgagatgttggactctatc
aaagctttgcggtcacgaatcgaagagattcgccgtccacggggcgactcacggggtaac
cccgctcgaacttgtaaagatctcaagttgtgcaaccgagccaaaaaagatgatcactac
tggattgatcccaacaacggctgcactgaggacgccattaaagtcttctgtaacttcacc
tctggtggagaaacatgtatttatcctgacaataggacaagatcgggagagcgtaagagc
tggaggaaggtcgacggagcagaatggtttagcgaatatgatggtggatatgagatctcs
tacaaagacgtaggcaagacgcaactcaatttccttcgtctgttaagcgaaaaagctgty
cagaatttcacctattattgcagtggttctgtggcatggtacgacaatgttgccaaatcg
tacgagaaggcaattcgactgcaaggcgataacgacgatgtgattggatatacgaagaac
cgatttagtatcaaggttgttcacgacggatgccagaacaaggaaaaagacggcaaagct
atattccaaattgtaactgaagatcttaaccaaatgcccattgtagattttgctcccgga
gatttgaaggaatcgttagaattcgggtttgaagtaggcccaatttgttttagttag

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