KEGG   Exaiptasia diaphana (Aiptasia): 110244760
Entry
110244760         CDS       T05080                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
epa  Exaiptasia diaphana (Aiptasia)
Pathway
epa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:epa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110244760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:epa03041]
    110244760
Spliceosome [BR:epa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    110244760
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_TEP1_C PRP4 WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_Vps41 NBCH_WD40 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_WDR19_1st WD40_like Beta-prop_SCAP WD_LRWD1 Flexi_CP_N Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 110244760
NCBI-ProteinID: XP_020906643
UniProt: A0A913XLB1
LinkDB
Position
Unknown
AA seq 516 aa
MSDDEEGAPREKKQRIYFGSLEELERERLSKXSAPSEELSEDGGKKRENGISESILAGIQ
AGNINISEGEFHDIVEDTSERHKELLAEFEKRKKARLITVPTDIPSVKARLRELGQPITL
FGEGALERRERLRSILSNLGDDVLTXEEKTPQEIPPHENEEVWYHEGPEELKIARTWIAN
YSLPRACQRLKKDRIMQARPDPEKAAKTQELHRKLRSLNNLCSQIGDDRPLSYCQFSPDS
KMLATASWSGLCKLWSVPDCEPISILKGHNERVGAIVFHPQATLSLDENGPSMASCAADG
SVKLWSFKSDTPIANIEGHEKRVSRLAYHPSGRFLGTCCFDNSWRLWDLEQLKEVLHQEG
HSREVYNIAFQIDGSLCATCGLDARGLVWDLRTGQCIMPLDGHLKKVFGIDFAPNGYHIA
TGSEDQKVMIWDLRKRQCLYTIPAHTNLISHVKYHDDYLLSASYDCKVKVWSQPGWAPLK
TLGGHEQKVTCVDISPDGHYIASTSFDRTFKLWTSE
NT seq 1551 nt   +upstreamnt  +downstreamnt
atgtcggacgatgaagaaggkgcmcctagggaaaagaaacagcgaatatattttggaagt
ttggaggaattagaaagagagcggctttccaaagmaagcgcgccaagtgaagagctgtca
gaagatggcggtaaaaaacgagaaaatggcatatctgagtctattctggctggaatacaa
gctggaaatatcaatatatctgaaggagaatttcatgacattgtggaagacacgtcagaa
agacacaaggaactcttagccgaatttgaaaagaggaaaaaggctcgtttaataacagta
cctacygacataccttcagtcaaggcaagactacgagaactaggacagccaattacattg
tttggagaaggagcccttgaaagaagagaaagattacgaagcattctatccaatcttggg
gatgatgttctcacarttgaggaaaagacaccacaggagataccacctcatgaaaatgag
gaggtctggtaccatgaaggacccgaggaacttaagatagctcgtacatggattgcaaat
tattccttaccaagggcatgtcaaaggcttaaaaaggacagaatcatgcaggccagacct
gatccagaaaaggctgcaaaaacacaagaacttcatcggaaacttaggtctttgaataat
ttgtgcagccaaattggagacgacagacctctgtcttattgtcagttttctccagattca
aaaatgttggcaacagcttcatggagtggactttgcaaactttggtcagttcctgactgt
gagccaatctcaatattgaaaggacataatgaacgtgttggcgcaatagtatttcaccct
caagcaactctaagtttagatgaaaatggaccatccatggcttcctgtgcggctgatggt
tcagtcaagctgtggtctttcaaatctgacacwcccattgcaaacatagaaggccatgaa
aaaagagtatctcgtctagcttatcatccgtcaggacgttttcttggaacttgctgtttt
gataactcctggaggttatgggatcttgaacagctcaaggaagtacttcatcaggagggg
catagtagagaagtatacaacatagcattccagatagatggatccctatgtgcaacatgt
ggtcttgatgcacgtggactagtctgggatctacgaacaggacaatgcatcatgcctcta
gatggtcatcttaaaaaagtatttggtattgattttgcaccaaatggttatcatattgct
acaggaagtgaagatcagaaggttatgatatgggatttacggaaacggcagtgtctgtat
actataccagctcatacaaaccttatatcgcatgttaaataccatgatgattatttactg
tctgcytcctatgactgtaaagtaaaggtgtggtcccaaccaggatgggctcctctraaa
acccttggtggtcatgaacagaaagtaacatgtgtagacatctcaccagatggacactac
atcgcttccacatcatttgacagaactttcaaattatggacatctgaataa

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