Exaiptasia diaphana (Aiptasia): 110244781
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Entry
110244781 CDS
T05080
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110244781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epa03019
]
110244781
Messenger RNA biogenesis [BR:
epa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110244781
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
110244781
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
EXOSC1
ECR1_N_2
CD1375-like
Motif
Other DBs
NCBI-GeneID:
110244781
NCBI-ProteinID:
XP_020906665
UniProt:
A0A913XN19
LinkDB
All DBs
Position
Unknown
AA seq
295 aa
AA seq
DB search
MSVDIRLPSKRRTLPRQVDSEPKHIVSPGDVISEDLGYMRGHGTFVQDDKLIASVSGIVE
RVNKLICVRPFNTRYNGEIGDVVVGRITEVGQKRWKVETFSRLDSVLLLSSVNLPGGELR
RRSSKDELMMREYFTEGDLISAEVQSIFADGSLSLHARSLKYGKLRQGTLVQVPPTMVKR
CKTHFHNLQCGATVIMGNNGSVWISPLVKEQSVATDVQEDQTLIDNTPQRISPTDRETIS
RLRNCVLALAEHSILLFDTSLMYAYEESIKYSVKDLLKPEVKEEIANIVRQQLYQ
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtcygtcgacataagattgccaagtaaaaggagaacgcttccccggcaggttgactca
gaaccaaagcatattgtttcgccaggagatgtgatttcggaagatcttggttacatgagg
ggacatggcacatttgttcaggatgacaaattgattgcttctgtttctggaattgtggaa
agagtaaataaactgatttgcgtcagacctttcaatacaaggtataatggcgaaattgga
gatgttgttgtggggagaatcaccgaggttggtcaaaaacgatggaaagtagaaacattt
tccagacttgattcagttcttttactttcctcagtaaatcttcctggtggggaattgaga
agaagatcaagcaaggatgagctcatgatgagagaatactttacagaaggagatctgatt
agtgcagaagtgcagtccatctttgcagatggatcattatcacttcatgcaagaagctta
aagtatggaaagctaagacagggtacccttgttcaagttcctccaacaatggtaaagcgc
tgcaagacccatttccataatctacagtgtggtgccacagttatcatgggaaataacggg
tctgtctggattagtccactggttaaggaacagtctgtggctacagatgtccaggaagat
cagactytgattgacaacacgccacaacgtatctcgccgacggacagagaaacaatctct
agacttcgtaactgtgttttagcactagctgaacattccatattattgtttgatacaagt
ttaatgtatgcatatgaggaatctatcaaatattcggtaaaagatcttttaaagcctgaa
gtcaaagaagaaatagctaacattgttcgacagcagctttaccaatga
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