Exaiptasia diaphana (Aiptasia): 110246296
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Entry
110246296 CDS
T05080
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110246296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
epa03041
]
110246296
03009 Ribosome biogenesis [BR:
epa03009
]
110246296
Enzymes [BR:
epa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110246296
Spliceosome [BR:
epa03041
]
Complex A
U2 snRNP components
U2 related factors
110246296
Complex B
110246296
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
110246296
Ribosome biogenesis [BR:
epa03009
]
Eukaryotic type
90S particles
Helicases
110246296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
AAA_22
DEAD
AAA_19
nSTAND3
ABC_tran
ResIII
SRP54
Flavi_DEAD
AAA_7
TsaE
TrwB_AAD_bind
PhoH
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
110246296
NCBI-ProteinID:
XP_020908289
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MSKRRLDVSGNGNNTANSPISTAKRIKEELSNPSNLRGKVNPYNGRPFTERYFDILKKRI
DLPVWEYREEFMETVKRNKILALVGETGSGKTTQIPQWCLEVRQDKSRKVACTQPRRVAA
MSVAQRVADELDVVLGQEVGYTIRFEDCTGPRTALKYMTDGMLLREAMTDPLLERYAVIL
LDEAHERTLATDILMGLLKEVVKQRHDLKIIIMSATLDAGKFQEYFDNCPLMKIPGRTHP
VEIFYTPQPERDYLEAAIRTVIQIHMCEDIAGDILLFLTGQEEIEEACKRIKKEVDNHGT
EIGEMKCIPLYSTLPPQQQQRIFESAPPNRPNGAIGRKCVVATNIAETSLTIDGVVFVID
PGFSKQKVYNPRIRVESLLVSAISMASAEQRAGRAGRTRPGKCFRLYTEKAYQTEMPKNT
YPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLGALDDNGDLTEL
GNMMAEFPLDPQLAKMVIASCEFNCSNEILSITSMLSVPQIFMRPTEAKKAADEAKMKFA
HIDGDHLTLLNVFHAFKQNHDDAQWCYDNFIQQRSLKSADNIRSQLARIMDRFKLARKST
DFNSRDYYLNIRKALVSGFFMQVAHLERSGHYLTVKDNQVVQLHPSTCLDHKPEWVLYNE
FVLTTKNYIRTVTEIKPEWLIKFAPVYYDMRNFPMCEAKRVLERIVEKLQRVK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacgacggttagatgtaagtggaaatggtaataatactgcaaatagtcctata
tctacagctaaaaggataaaagaggagctaagtaacccaagtaatcttcgagggaaggtg
aatccctacaatggccgaccttttacagaacggtactttgatattttaaagaagagaata
gacttgcctgtytgggaataccgggaggagtttatggaaactgttaaaagaaataagatt
ctcgctttggtgggagaaacgggttcaggaaaaactacacagataccacaatggtgctta
gaagtaaggcaagacaaaagtagaaaagtagcttgtactcaacccagacgagtagctgct
atgagtgttgctcaacgtgttgcagatgaattagatgtggttttgggtcaagaagttggt
tatactataagatttgaggattgtacaggtccaaggacagcattaaagtacatgacagat
ggtatgttgttgcgtgaagctatgacggacccgttattagaacgttatgctgtcatactt
cttgatgaagctcacgagagaacattagcaacagacatactaatgggaytactgaaagag
gttgtcaaacagagacatgatctgaagatcatcatcatgagtgctacacttgatgcaggc
aagttccaggaatactttgacaactgtccactgatgaaaattcctggtcgaacacaccct
gtagagatcttttacacgccacagccagaaagagactatctagaggcagctatccgtaca
gtwatccagatacacatgtgtgaggacattgctggggatattttactttttctgactgga
caagaggaaattgaagaagcttgtaaaagaataaagaaagaagtagacaatcatggtaca
gaaattggtgaaatgaaatgcattcctttgtactccactcttcctccacaacagcagcag
cgtatctttgaatcagctcctccaaacagaccaaacggtgccattggacgcaagtgtgta
gtggcaacyaacattgcagagacttccttaacaattgatggagttgtatttgtgattgat
ccaggtttctctaaacaaaaagtatacaatcctcgtatycgtgtggagtcactgctagtt
tcagctatttccatggctagtgcygaacagcgtgctggtcgtgctggtcgtactcgtcca
ggaaagtgctttagactctacacagagaaggcctaccagacagaaatgcctaagaatacc
tatccagaaatcttgcgctcaaaccttggtaccgttgtactgcagcttaagaaacttggt
attgacgacttggtgcattttgacttcatggaccctccagcaccggaaactttaatgcgt
gcactggagcttctaaactaccttggtgccttggatgacaatggagatttgacagaactt
ggcaatatgatggcagagtttccactagatccacagcttgccaaaatggtcattgctagt
tgcgagtttaattgctcaaatgaaatactttcaatcacgtckatgctttcagttcctcag
attttcatgaggcccactgaagccaaaaaggcagcagatgaagccaagatgaagtttgct
cacattgatggtgatcacctaactcttctaaatgtcttccatgctttcaaacaaaatcac
gacgatgctcaatggtgttacgataattttatacaacaacgttcacttaaatcagctgac
aacatcagatcacagctagctcgaattatggaccggtttaaactagcacgaaagagtacg
gactttaacagcagagactattatctgaacattagaaaagccttggtgtcgggattcttc
atgcaggtggcacatctagagaggtctggacactacttgacagtcaaggataaccaggta
gtacagctgcatccgtcaacatgtttggaccacaaaccagaatgggttttatacaacgag
tttgtcctcacaaccaagaactacattagaactgtaaccgagatcaagcctgaatggtta
atcaaatttgcccctgtctactacgacatgaggaacttcccaatgtgtgaggctaagagg
gtgctggaaagaatygtggagaaactacagagagtcaagtga
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