Exaiptasia diaphana (Aiptasia): 110246660
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Entry
110246660 CDS
T05080
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110246660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epa03019
]
110246660
Messenger RNA biogenesis [BR:
epa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110246660
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110246660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
ECH_1
Motif
Other DBs
NCBI-GeneID:
110246660
NCBI-ProteinID:
XP_028517164
UniProt:
A0A913YPT4
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MADKRKLQGEIERCLKKVSEGVETFEDIWQKVHNASNSNQKEKYEADLKKEIKKLQRLRD
QIKTWVASNDIKDKKTLLDNRKLIEQQMERFKVVERETKTKAYSKEGLGLAAKIDPAQKE
KEEARQWITEVLDKLRLQVDQFESEVEQMFAGSKKKKLDKDKQDKVEELHTWAEKHRYHT
EKLEIVLRMLDNGKIESDDIKQLRDDMDYHLDCFQDPDYQENEFMYDDFDFEEETGEEND
ADSCKCVMLSTVKPFFMSFLNXFNQNSPRKNSKGTSSLVNSILPGTTPPRPPLKPSLSNP
GQPSTTPVITAVETKPSNGSSKTTSSIITNSFENHSSSNGEEVLSSSKTPTEVTPPPPVS
GYAVVAGGQQNHVDAQPPRMVNHTPATTTSSTSSIARPTSSVVNSHDHILPHSNGPFLSD
VNHASDISKLVSAVTSLSMSPAPTINATSNTFPGRNPALGKPSSSVVGPPPPVSTPLTAP
SSLPSSSLPNSSSSIGMMGMSGSMTSSLLTSSSNTVLSKPPMSSVESIAVSTGSVGSLMS
SAQFMGSPVSRHVTTDSFSSLKSIAAQAVATANLHSQVQLPNEYSAESRELENRFNTEEK
TSKFLTRLFDSTSTSRTLEETKVPIETNTAHLQPLLGVAPLGPVPLNKERCYQLAMLEAA
HHHLPQPADSERVRPCLSRNPYPAPPYYHQHPPAHLESIDFYQRLQPETLFFIFYYQEGT
RAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKAITDEYEQGTYIYFDYEKWGQRKKEGFT
FEYRYLEDKDLP
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaaaggaagcttcaaggcgagattgagcgctgccttaaaaaagtcagtgaa
ggagtcgaaacatttgaagatatttggcagaaggtacacaatgcatctaactctaatcag
aaggagaaatacgaggcggaccttaaaaaagaaattaaaaaattacagcgacttcgagac
cagattaagacatgggtcgcatcgaacgacatcaaagacaagaaaacattattggacaat
cgaaagctcattgaacaacaaatggaaaggttcaaggttgtagaaagagaaacraaaact
aaagcatactctaaagaaggtttaggtctagcggcaaagattgatcctgcccaaaaagag
aaggaagaagctagacaatggataacggaagttcttgataaacttagacttcaggttgat
cagtttgaaagcgaagtggagcaaatgtttgctggatcaaagaagaaaaaacttgataaa
gataagcaagataaagtagaagagcttcatacttgggcagaaaaacaccgatatcatact
gaaaaactagagatcgtattgagaatgctggataatggaaaaattgaaagcgatgatatc
aaacagcttcgagatgacatggattatcacttagattgctttcaagacccagactaccag
gaaaacgagttcatgtatgacgattttgattttgaagaagaaacgggcgaagaaaatgat
gctgattcttgtaagtgtgtcatgctatctactgttaaacctttctttatgtcattttta
aatwtttttaatcagaactcaccacgtaagaactccaagggtacatctagtttagtaaat
agcatcttaccagggactacaccacctcgaccaccgttaaaacctagtttatctaatcct
ggacaaccttctacaactcctgttattactgctgttgaaaccaaaccaagtaatgggtct
tctaagacaaccagctctattataacaaattcctttgaaaaccactcgtccagtaatggg
gaagaagttctaagtagttccaagactccgacggaggtcacgccccctccgccagtttca
ggctatgccgttgtcgctggtgggcaacaaaaccatgtggatgcccaaccccctagaatg
gttaaccacaccccagctaccaccacgtcgtcaacgtcaagtatagcaagacccacttca
tctgtagttaatagtcatgaccacatattgccgcatagcaatggtccttttctttcagat
gtaaaccacgctagcgatatttccaaactcgtatctgcagtaacgtctctttcaatgtca
ccggccccaacgataaatgcaacttcaaacactttccctggacgaaacccagcactcggc
aagccatcatcatcagtagtaggccccccaccacccgtatcgacacctctaacggcacca
tcgtctctaccatccagctcattacctaattctagcagttccataggcatgatgggaatg
tctgggagtatgacgtcatcactgttaaccagttcatctaacacagtgcttagtaaaccc
cctatgtcatcggtagaaagtattgcagtgtcaacggggtctgttgggtctttgatgagt
agtgcacagtttatgggtagtcctgtatcgagacatgtcacaaccgattcgttttcatct
cttaagtccatcgcagcacaagctgtcgctactgctaatctacatagtcaagtacaactc
cctaatgaatattcagcggaaagtagagagcttgaaaacagattcaacactgaagaaaag
acttcaaagtttcttacaaggctatttgattcaacatcaacaagtcgaactctagaggag
accaaggtacctatagagacgaatacagcacacttrcaaccgttgctgggcgtggcacca
ttaggacctgtacccttaaacaaggagaggtgttatcagttagcgatgttagaggctgct
caccatcatttaccacaaccagcagattctgaaagagtccggccatgtttgtccaggaat
ccttacccagcaccaccatactatcaccagcatccgccagctcacctggaaagcatagay
ttctaccaaaggctacagccagaaacgttgttctttattttctattaccaagagggaacc
cgggcacaatacttggcagcaaaagcgcttaaaaagcaatcttggagattccatacaaag
tatatgatgtggtttcaaagacacgaagagcccaaggctatcactgatgaatatgaacag
ggtacatacatttattttgattatgaaaagtggggtcaaagaaaaaaggaaggattcacg
ttcgagtatcgctatctagaagacaaagacctcccatag
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