Exaiptasia diaphana (Aiptasia): 110248067
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Entry
110248067 CDS
T05080
Name
(RefSeq) uncharacterized protein LOC110248067
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
epa
Exaiptasia diaphana (Aiptasia)
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
epa03016
]
110248067
Enzymes [BR:
epa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
110248067
Transfer RNA biogenesis [BR:
epa03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
110248067
Prokaryotic type
tRNA splicing ligases
110248067
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
P4Ha_N
Motif
Other DBs
NCBI-GeneID:
110248067
NCBI-ProteinID:
XP_020910220
UniProt:
A0A913XUX9
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MLRISVVARSSEFLSLKRISNHLRSSSSFITLPKENKDQVPIKAWIRNVPVEEDAQGQLQ
AIAKLPIVYSHVAAMPDVHIGKGACVGCVVPTINAIIPAAVGVDIGCGMMAVKTSLHANQ
LPDSLKXLRSAVECAIPHGRTNHGKTGDIGSWKMNRIPEIVKKQWSQISKDYEYICTKQP
SAKAKXNVNHLGTLGTGNHFIEMCLDEWDSVWFMLHSGSRGPGNRIGSVYIELAKEDMIK
IDKTAKVDKNLSYLKEGTQNFKNYVFAVSWAQKYAKLNRQIMMTHLIDAAKRCPDMPSFS
VDLQNAAVNCHHNYVNVETHFGQEVYLTRKGAVSARKNELGIIPGSMGAKSYIVRGRGNP
DSFHSCSHGAGRVMSRTKAKKTFTIQDHIQATQGVECRKDSSVIDETPMAYKDIDQVMAA
QSDLVDVVHTLKQVLCVKG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgcatctcagttgttgcaagaagtagtgaatttctttctttgaaacgcataagc
aatcacttgagaagctcatcatcgttcatcactcttcctaaggaaaataaggaccaggta
cctatcaaagcatggatccgtaatgtccctgttgaagaagatgcacaaggacaattgcag
gccattgcaaaattaccaattgtttactcgcatgtcgctgccatgccagatgtgcacatt
gggaaaggtgcttgcgttggttgtgtagttccaacaattaatgcaatcatccctgcagcc
gtgggggtagacattgggtgtgggatgatggctgtcaaaacttctcttcatgcaaatcag
ctgcctgattcactgaaamgtctccgctcagcagtagaatgtgctatcccacatgggaga
acaaaccatggaaaaactggtgatataggctcctggaaaatgaatagaataccagaaata
gttaagaaacaatggagtcaaatatctaaagattatgagtacatatgcaccaaacagcct
tctgcaaaagccaagartaatgttaaccatttagggacycttggractggaaatcacttt
attgagatgtgcctggatgagtgggatagtgtgtggttcatgcttcattcagggtcacgt
ggtccaggcaacaggattggttcagtctacatagaactagccaaagaagacatgatcaag
attgataaaactgcaaaggtcgacaagaatttatcatatctcaaggaaggcacgcaaaac
ttcaaaaactatgtgtttgcagtctcttgggcacagaaatatgctaaaytgaacagacaa
attatgatgactcatttgattgatgctgcaaagaggtgtcctgatatgccatccttctca
gttgatctacaaaatgctgcagtcaactgccatcataactatgtcaatgttgaaacccat
tttggtcaagaggtttatcttacacgaaaaggcgcagtttccgcacgtaaaaatgagctt
ggtatcattcctggctcgatgggagccaagtcatacatcgttagagggagaggaaatccc
gactcatttcacagctgtagccacggtgctgggagagtcatgtccaggacaaaagccaaa
aagacgtttactatacaagatcacatccaagccacacaaggtgtagagtgccgtaaggat
tcctcagtcattgatgaaacaccaatggcttacaaagacatcgatcaagtcatggcagct
caaagtgacctagttgacgtagtacacacactaaaacaggttttgtgcgtcaagggctga
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